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Information on 1d8w
PDB: 1d8w
Compound: l-rhamnose isomerase
Classification: ISOMERASE
Entry date in PDB: 2000-09-27
Resolution [Å]: 1.60
R-Factor: 0.178


CHAIN: A
SWISS-PROT/TREMBL: P32170
   KEYWORD: 3D-structure    Complete proteome    Isomerase    Manganese    Metal-binding    Rhamnose metabolism    Zinc   
EC: 5.3.1.14
SCOP: c.1.15.2 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Xylose isomerase-like    L-rhamnose isomerase    L-rhamnose isomerase    Escherichia coli
GO:  L-rhamnose isomerase activity    manganese ion binding    rhamnose metabolism   


CHAIN: B
SWISS-PROT/TREMBL: P32170
   KEYWORD: 3D-structure    Complete proteome    Isomerase    Manganese    Metal-binding    Rhamnose metabolism    Zinc   
EC: 5.3.1.14
SCOP: c.1.15.2 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Xylose isomerase-like    L-rhamnose isomerase    L-rhamnose isomerase    Escherichia coli
GO:  L-rhamnose isomerase activity    manganese ion binding    rhamnose metabolism   


CHAIN: C
SWISS-PROT/TREMBL: P32170
   KEYWORD: 3D-structure    Complete proteome    Isomerase    Manganese    Metal-binding    Rhamnose metabolism    Zinc   
EC: 5.3.1.14
SCOP: c.1.15.2 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Xylose isomerase-like    L-rhamnose isomerase    L-rhamnose isomerase    Escherichia coli
GO:  L-rhamnose isomerase activity    manganese ion binding    rhamnose metabolism   


CHAIN: D
SWISS-PROT/TREMBL: P32170
   KEYWORD: 3D-structure    Complete proteome    Isomerase    Manganese    Metal-binding    Rhamnose metabolism    Zinc   
EC: 5.3.1.14
SCOP: c.1.15.2 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Xylose isomerase-like    L-rhamnose isomerase    L-rhamnose isomerase    Escherichia coli
GO:  L-rhamnose isomerase activity    manganese ion binding    rhamnose metabolism   
1d8w Image
Image Source: PDB

Stored Loops of 1d8w

Loops in ArchDB40 clusters

1d8w_A_377 - HH => SUBCLASS : 1.1.33
1d8w_A_365 - HH => SUBCLASS : 2.2.2
1d8w_A_12 - HH => SUBCLASS : 3.1.6

Loops in ArchDB95 clusters

1d8w_A_377 - HH => SUBCLASS : 1.1.43
1d8w_A_365 - HH => SUBCLASS : 2.2.8
1d8w_A_12 - HH => SUBCLASS : 3.4.7

Loops in ArchDB-EC clusters

1d8w_A_12 - HH => SUBCLASS : 3.8.1

Loops not clustered in ArchDB

1d8w_A_99 - EH
1d8w_A_136 - EH
1d8w_A_232 - EH
1d8w_A_263 - EH
1d8w_A_291 - EH
1d8w_A_329 - EH
1d8w_A_311 - HE
1d8w_A_277 - HE
1d8w_A_256 - HE
1d8w_A_206 - HE
1d8w_A_124 - HE
1d8w_A_80 - HE
1d8w_A_31 - HH
1d8w_A_160 - HH
1d8w_A_342 - HH
1d8w_A_355 - HH
1d8w_A_392 - HH

Homologous structures to 1d8w classified in ArchDB

1d8w A - percentage of sequence identity: 100
1d8w B - percentage of sequence identity: 100
1d8w C - percentage of sequence identity: 100
1d8w D - percentage of sequence identity: 100
1de5 A - percentage of sequence identity: 100
1de5 B - percentage of sequence identity: 100
1de5 C - percentage of sequence identity: 100
1de5 D - percentage of sequence identity: 100
1de6 A - percentage of sequence identity: 100
1de6 B - percentage of sequence identity: 100
1de6 C - percentage of sequence identity: 100
1de6 D - percentage of sequence identity: 100