PDB: 1dl5 Compound: protein-l-isoaspartate o-methyltransferase Classification: TRANSFERASE Entry date in PDB: 2000-12-08 Resolution [Å]: 1.80 R-Factor: 0.182

CHAIN: A SWISS-PROT/TREMBL: Q56308    KEYWORD: 3D-structure    Complete proteome    Methyltransferase    Transferase    EC: 2.1.1.77 SCOP: c.66.1.7 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    Protein-L-isoaspartyl O-methyltransferase    Protein-L-isoaspartyl O-methyltransferase    Thermotoga maritima SCOP: d.197.1.1 Alpha and beta proteins (a+b)    Protein-L-isoaspartyl O-methyltransferase, C-terminal domain    Protein-L-isoaspartyl O-methyltransferase, C-terminal domain    Protein-L-isoaspartyl O-methyltransferase, C-terminal domain    Protein-L-isoaspartyl O-methyltransferase, C-terminal domain    Thermotoga maritima GO:  nucleus    protein-L-isoaspartate (D-aspartate) O-methyltransferase activity    RNA binding    S-adenosylmethionine-dependent methyltransferase activity    protein modification    rRNA processing    CHAIN: B SWISS-PROT/TREMBL: Q56308    KEYWORD: 3D-structure    Complete proteome    Methyltransferase    Transferase    EC: 2.1.1.77 SCOP: c.66.1.7 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    Protein-L-isoaspartyl O-methyltransferase    Protein-L-isoaspartyl O-methyltransferase    Thermotoga maritima SCOP: d.197.1.1 Alpha and beta proteins (a+b)    Protein-L-isoaspartyl O-methyltransferase, C-terminal domain    Protein-L-isoaspartyl O-methyltransferase, C-terminal domain    Protein-L-isoaspartyl O-methyltransferase, C-terminal domain    Protein-L-isoaspartyl O-methyltransferase, C-terminal domain    Thermotoga maritima GO:  nucleus    protein-L-isoaspartate (D-aspartate) O-methyltransferase activity    RNA binding    S-adenosylmethionine-dependent methyltransferase activity    protein modification    rRNA processing

Image Source: PDB

Loops in ArchDB40 clusters

1dl5_A_159 - HE => SUBCLASS : 0.1.16
1dl5_A_110 - HE => SUBCLASS : 4.9.1
1dl5_A_88 - HE => SUBCLASS : 4.28.1
1dl5_A_281 - HE => SUBCLASS : 6.1.3
1dl5_A_61 - HE => SUBCLASS : 6.6.1
1dl5_A_257 - HA => SUBCLASS : 2.2.3
1dl5_A_184 - HA => SUBCLASS : 2.5.1
1dl5_A_265 - HA => SUBCLASS : 2.6.1
1dl5_A_302 - HA => SUBCLASS : 5.18.1
1dl5_A_55 - EH => SUBCLASS : 1.1.4
1dl5_A_102 - EH => SUBCLASS : 2.1.1
1dl5_A_228 - EH => SUBCLASS : 2.6.4
1dl5_A_78 - EH => SUBCLASS : 5.6.1
1dl5_A_128 - AR => SUBCLASS : 12.1.1
1dl5_A_2 - HH => SUBCLASS : 3.3.1

Loops in ArchDB95 clusters

1dl5_A_102 - EH => SUBCLASS : 2.1.1
1dl5_A_55 - EH => SUBCLASS : 2.2.1
1dl5_A_78 - EH => SUBCLASS : 5.11.1
1dl5_A_128 - AR => SUBCLASS : 12.11.1
1dl5_A_2 - HH => SUBCLASS : 3.2.1
1dl5_A_159 - HE => SUBCLASS : 0.1.24
1dl5_A_110 - HE => SUBCLASS : 4.7.3
1dl5_A_88 - HE => SUBCLASS : 4.14.1
1dl5_A_61 - HE => SUBCLASS : 6.4.1
1dl5_A_257 - HA => SUBCLASS : 2.2.3
1dl5_A_265 - HA => SUBCLASS : 2.4.1
1dl5_A_184 - HA => SUBCLASS : 2.4.1
1dl5_A_184 - HA => SUBCLASS : 2.4.2
1dl5_A_302 - HA => SUBCLASS : 5.18.1

Loops in ArchDB-EC clusters

1dl5_A_2 - HH => SUBCLASS : 3.2.1

Loops not clustered in ArchDB

1dl5_A_128 - AR
1dl5_A_145 - EH
1dl5_A_194 - EH
1dl5_A_273 - EH
1dl5_A_164 - HA
1dl5_A_184 - HA
1dl5_A_251 - HA
1dl5_A_257 - HA
1dl5_A_265 - HA
1dl5_A_46 - HA
1dl5_A_251 - HA
1dl5_A_164 - HA
1dl5_A_46 - HA
1dl5_A_302 - HA
1dl5_A_237 - HE
1dl5_A_215 - HE
1dl5_A_37 - HE
1dl5_A_16 - HH

1dl5 A - percentage of sequence identity: 100
1dl5 B - percentage of sequence identity: 100