PDB: 1dnp Compound: DNA photolyase Classification: LYASE (CARBON-CARBON) Entry date in PDB: 1996-08-01 Resolution [Å]: 2.30 R-Factor: 0.172

CHAIN: A SWISS-PROT/TREMBL: P00914    KEYWORD: 3D-structure    Chromophore    Complete proteome    DNA repair    DNA-binding    FAD    Flavoprotein    Lyase    EC: 4.1.99.3 SCOP: a.99.1.1 All alpha proteins    Cryptochrome/photolyase FAD-binding domain    Cryptochrome/photolyase FAD-binding domain    Cryptochrome/photolyase FAD-binding domain    C-terminal domain of DNA photolyase    Escherichia coli SCOP: c.28.1.1 Alpha and beta proteins (a/b)    Cryptochrome/photolyase, N-terminal domain    Cryptochrome/photolyase, N-terminal domain    Cryptochrome/photolyase, N-terminal domain    DNA photolyase    Escherichia coli GO:  DNA photolyase activity    DNA repair    CHAIN: B SWISS-PROT/TREMBL: P00914    KEYWORD: 3D-structure    Chromophore    Complete proteome    DNA repair    DNA-binding    FAD    Flavoprotein    Lyase    EC: 4.1.99.3 SCOP: a.99.1.1 All alpha proteins    Cryptochrome/photolyase FAD-binding domain    Cryptochrome/photolyase FAD-binding domain    Cryptochrome/photolyase FAD-binding domain    C-terminal domain of DNA photolyase    Escherichia coli SCOP: c.28.1.1 Alpha and beta proteins (a/b)    Cryptochrome/photolyase, N-terminal domain    Cryptochrome/photolyase, N-terminal domain    Cryptochrome/photolyase, N-terminal domain    DNA photolyase    Escherichia coli GO:  DNA photolyase activity    DNA repair

Image Source: PDB

Loops in ArchDB40 clusters

1dnp_A_72 - EH => SUBCLASS : 2.1.2
1dnp_A_98 - EH => SUBCLASS : 4.12.3
1dnp_A_98 - EH => SUBCLASS : 4.15.2
1dnp_A_38 - HH => SUBCLASS : 3.2.1
1dnp_A_341 - HH => SUBCLASS : 3.2.4
1dnp_A_341 - HH => SUBCLASS : 3.2.8
1dnp_A_238 - HH => SUBCLASS : 4.1.2
1dnp_A_359 - HH => SUBCLASS : 5.2.1
1dnp_A_310 - HH => SUBCLASS : 5.33.1

Loops in ArchDB95 clusters

1dnp_A_72 - EH => SUBCLASS : 2.1.3
1dnp_A_98 - EH => SUBCLASS : 4.5.1
1dnp_A_401 - HH => SUBCLASS : 1.3.18
1dnp_A_38 - HH => SUBCLASS : 3.1.2
1dnp_A_341 - HH => SUBCLASS : 3.1.3
1dnp_A_341 - HH => SUBCLASS : 3.2.1
1dnp_A_38 - HH => SUBCLASS : 3.2.1
1dnp_A_238 - HH => SUBCLASS : 4.1.1
1dnp_A_359 - HH => SUBCLASS : 5.2.1
1dnp_A_310 - HH => SUBCLASS : 5.36.1
1dnp_A_48 - HE => SUBCLASS : 2.1.1
1dnp_A_80 - HE => SUBCLASS : 3.1.1
1dnp_A_80 - HE => SUBCLASS : 3.3.1
1dnp_A_107 - HE => SUBCLASS : 3.4.1
1dnp_A_107 - HE => SUBCLASS : 3.6.5
1dnp_A_17 - HE => SUBCLASS : 3.6.9
1dnp_A_17 - HE => SUBCLASS : 4.11.3

Loops in ArchDB-EC clusters

1dnp_A_359 - HH => SUBCLASS : 5.2.2

Loops not clustered in ArchDB

1dnp_A_2 - EH
1dnp_A_29 - EH
1dnp_A_124 - EH
1dnp_A_413 - HH
1dnp_A_375 - HH
1dnp_A_324 - HH
1dnp_A_269 - HH
1dnp_A_248 - HH
1dnp_A_218 - HH
1dnp_A_204 - HH
1dnp_A_150 - HH
1dnp_A_433 - HH

1dnp A - percentage of sequence identity: 100
1dnp B - percentage of sequence identity: 100