PDB: 1dv1 Compound: biotin carboxylase Classification: LIGASE Entry date in PDB: 2000-06-09 Resolution [Å]: 1.90 R-Factor: 0.182

CHAIN: A SWISS-PROT/TREMBL: P24182    KEYWORD: 3D-structure    ATP-binding    Biotin    Complete proteome    Fatty acid biosynthesis    Ligase    EC: 6.3.4.14 SCOP: b.84.2.1 All beta proteins    Barrel-sandwich hybrid    Rudiment single hybrid motif    BC C-terminal domain-like    Biotin carboxylase (BC), C-domain    Escherichia coli SCOP: c.30.1.1 Alpha and beta proteins (a/b)    PreATP-grasp domain    PreATP-grasp domain    BC N-terminal domain-like    Biotin carboxylase (BC), N-terminal domain    Escherichia coli SCOP: d.142.1.2 Alpha and beta proteins (a+b)    ATP-grasp    Glutathione synthetase ATP-binding domain-like    BC ATP-binding domain-like    Biotin carboxylase (BC), domain 2    Escherichia coli GO:  ATP binding    biotin binding    catalytic activity    ligase activity    metabolism    CHAIN: B SWISS-PROT/TREMBL: P24182    KEYWORD: 3D-structure    ATP-binding    Biotin    Complete proteome    Fatty acid biosynthesis    Ligase    EC: 6.3.4.14 SCOP: b.84.2.1 All beta proteins    Barrel-sandwich hybrid    Rudiment single hybrid motif    BC C-terminal domain-like    Biotin carboxylase (BC), C-domain    Escherichia coli SCOP: c.30.1.1 Alpha and beta proteins (a/b)    PreATP-grasp domain    PreATP-grasp domain    BC N-terminal domain-like    Biotin carboxylase (BC), N-terminal domain    Escherichia coli SCOP: d.142.1.2 Alpha and beta proteins (a+b)    ATP-grasp    Glutathione synthetase ATP-binding domain-like    BC ATP-binding domain-like    Biotin carboxylase (BC), domain 2    Escherichia coli GO:  ATP binding    biotin binding    catalytic activity    ligase activity    metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1dv1_A_384 - EH => SUBCLASS : 2.1.32
1dv1_A_352 - AR => SUBCLASS : 2.1.1
1dv1_A_198 - AR => SUBCLASS : 2.1.2
1dv1_A_198 - AR => SUBCLASS : 3.2.10
1dv1_A_418 - HH => SUBCLASS : 1.1.1
1dv1_A_107 - HH => SUBCLASS : 1.1.2
1dv1_A_107 - HH => SUBCLASS : 1.1.3
1dv1_A_297 - HH => SUBCLASS : 3.1.5

Loops in ArchDB95 clusters

1dv1_A_4 - EH => SUBCLASS : 3.51.1
1dv1_A_352 - AR => SUBCLASS : 1.2.8
1dv1_A_107 - HH => SUBCLASS : 1.1.1
1dv1_A_418 - HH => SUBCLASS : 1.1.2
1dv1_A_297 - HH => SUBCLASS : 3.1.12
1dv1_A_297 - HH => SUBCLASS : 3.4.1

Loops in ArchDB-EC clusters

1dv1_B_418 - HH => SUBCLASS : 1.1.6

Loops not clustered in ArchDB

1dv1_B_365 - AR
1dv1_A_333 - AR
1dv1_A_357 - AR
1dv1_A_365 - AR
1dv1_A_376 - AR
1dv1_A_198 - AR
1dv1_B_376 - AR
1dv1_A_333 - AR
1dv1_B_200 - AR
1dv1_A_352 - AR
1dv1_A_357 - AR
1dv1_A_365 - AR
1dv1_A_376 - AR
1dv1_B_333 - AR
1dv1_B_352 - AR
1dv1_B_356 - AR
1dv1_B_4 - EH
1dv1_B_410 - EH
1dv1_B_27 - EH
1dv1_B_101 - EH
1dv1_B_47 - EH
1dv1_B_170 - EH
1dv1_B_77 - EH
1dv1_A_410 - EH
1dv1_A_283 - EH
1dv1_A_237 - EH
1dv1_A_156 - EH
1dv1_B_237 - EH
1dv1_B_283 - EH
1dv1_A_101 - EH
1dv1_A_77 - EH
1dv1_A_47 - EH
1dv1_A_27 - EH
1dv1_B_384 - EH
1dv1_A_270 - HA
1dv1_A_208 - HA
1dv1_A_270 - HA
1dv1_A_222 - HA
1dv1_B_156 - HA
1dv1_B_208 - HA
1dv1_B_270 - HA
1dv1_A_222 - HA
1dv1_A_208 - HA
1dv1_B_222 - HA
1dv1_A_395 - HE
1dv1_B_11 - HE
1dv1_A_308 - HE
1dv1_B_308 - HE
1dv1_A_250 - HE
1dv1_A_175 - HE
1dv1_A_142 - HE
1dv1_A_89 - HE
1dv1_A_63 - HE
1dv1_A_40 - HE
1dv1_B_40 - HE
1dv1_B_63 - HE
1dv1_B_395 - HE
1dv1_B_250 - HE
1dv1_B_178 - HE
1dv1_B_142 - HE
1dv1_B_89 - HE
1dv1_A_11 - HE
1dv1_A_428 - HH
1dv1_A_116 - HH
1dv1_B_107 - HH
1dv1_B_116 - HH
1dv1_B_297 - HH
1dv1_B_428 - HH

1bnc A - percentage of sequence identity: 100
1bnc B - percentage of sequence identity: 100
1dv1 A - percentage of sequence identity: 100
1dv1 B - percentage of sequence identity: 100
1dv2 A - percentage of sequence identity: 99
1dv2 B - percentage of sequence identity: 99