PDB: 1ee8 Compound: mutm (fpg) protein Classification: DNA BINDING PROTEIN Entry date in PDB: 2001-01-31 Resolution [Å]: 1.90 R-Factor: 0.214

CHAIN: A SWISS-PROT/TREMBL: O50606    KEYWORD: 3D-structure    DNA repair    Glycosidase    Hydrolase    Zinc    Zinc-finger    EC: 3.2.2.23 SCOP: a.156.1.2 All alpha proteins    S13-like H2TH domain    S13-like H2TH domain    Middle domain of MutM-like DNA repair proteins    DNA repair protein MutM (Fpg)    Thermus thermophilus SCOP: b.113.1.1 All beta proteins    N-terminal domain of MutM-like DNA repair proteins    N-terminal domain of MutM-like DNA repair proteins    N-terminal domain of MutM-like DNA repair proteins    DNA repair protein MutM (Fpg)    Thermus thermophilus SCOP: g.39.1.8 Small proteins    Glucocorticoid receptor-like (DNA-binding domain)    Glucocorticoid receptor-like (DNA-binding domain)    C-terminal, Zn-finger domain of MutM-like DNA repair proteins    DNA repair protein MutM (Fpg)    Thermus thermophilus GO:  zinc ion binding    DNA repair    CHAIN: B SWISS-PROT/TREMBL: O50606    KEYWORD: 3D-structure    DNA repair    Glycosidase    Hydrolase    Zinc    Zinc-finger    EC: 3.2.2.23 SCOP: a.156.1.2 All alpha proteins    S13-like H2TH domain    S13-like H2TH domain    Middle domain of MutM-like DNA repair proteins    DNA repair protein MutM (Fpg)    Thermus thermophilus SCOP: b.113.1.1 All beta proteins    N-terminal domain of MutM-like DNA repair proteins    N-terminal domain of MutM-like DNA repair proteins    N-terminal domain of MutM-like DNA repair proteins    DNA repair protein MutM (Fpg)    Thermus thermophilus SCOP: g.39.1.8 Small proteins    Glucocorticoid receptor-like (DNA-binding domain)    Glucocorticoid receptor-like (DNA-binding domain)    C-terminal, Zn-finger domain of MutM-like DNA repair proteins    DNA repair protein MutM (Fpg)    Thermus thermophilus GO:  zinc ion binding    DNA repair

Image Source: PDB

Loops in ArchDB40 clusters

1ee8_A_246 - HA => SUBCLASS : 2.1.1
1ee8_A_53 - HA => SUBCLASS : 2.1.1
1ee8_A_82 - HA => SUBCLASS : 2.2.13
1ee8_A_82 - HA => SUBCLASS : 2.2.26
1ee8_A_62 - AR => SUBCLASS : 4.30.1
1ee8_A_92 - AR => SUBCLASS : 5.15.1
1ee8_A_132 - HH => SUBCLASS : 4.19.1
1ee8_A_161 - HH => SUBCLASS : 12.1.1

Loops in ArchDB95 clusters

1ee8_A_62 - AR => SUBCLASS : 4.33.1
1ee8_A_92 - AR => SUBCLASS : 5.19.1
1ee8_A_132 - HH => SUBCLASS : 4.25.1
1ee8_A_132 - HH => SUBCLASS : 4.29.1
1ee8_A_161 - HH => SUBCLASS : 12.3.1
1ee8_A_3 - HE => SUBCLASS : 3.8.1
1ee8_A_3 - HE => SUBCLASS : 3.8.2
1ee8_A_246 - HA => SUBCLASS : 2.1.1
1ee8_A_53 - HA => SUBCLASS : 2.1.1
1ee8_A_82 - HA => SUBCLASS : 2.2.6
1ee8_A_53 - HA => SUBCLASS : 3.2.1

Loops in ArchDB-EC clusters

1ee8_A_132 - HH => SUBCLASS : 4.9.2

Loops not clustered in ArchDB

1ee8_A_21 - AR
1ee8_A_92 - AR
1ee8_A_73 - AR
1ee8_A_62 - AR
1ee8_A_21 - AR
1ee8_A_33 - AR
1ee8_A_33 - AR
1ee8_A_73 - AR
1ee8_A_103 - EH
1ee8_A_42 - HA
1ee8_A_42 - HA
1ee8_A_53 - HA
1ee8_A_82 - HA
1ee8_A_246 - HA
1ee8_A_184 - HE
1ee8_A_146 - HH
1ee8_A_117 - HH

1ee8 A - percentage of sequence identity: 100
1ee8 B - percentage of sequence identity: 100