PDB: 1ef8 Compound: methylmalonyl coa decarboxylase Classification: LYASE Entry date in PDB: 2000-05-24 Resolution [Å]: 1.85 R-Factor: 0.180

CHAIN: A SWISS-PROT/TREMBL: P52045    KEYWORD: 3D-structure    Complete proteome    Hypothetical protein    Lyase    SCOP: c.14.1.3 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Crotonase-like    Methylmalonyl CoA decarboxylase    Escherichia coli GO:  catalytic activity    metabolism    CHAIN: B SWISS-PROT/TREMBL: P52045    KEYWORD: 3D-structure    Complete proteome    Hypothetical protein    Lyase    SCOP: c.14.1.3 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Crotonase-like    Methylmalonyl CoA decarboxylase    Escherichia coli GO:  catalytic activity    metabolism    CHAIN: C SWISS-PROT/TREMBL: P52045    KEYWORD: 3D-structure    Complete proteome    Hypothetical protein    Lyase    SCOP: c.14.1.3 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Crotonase-like    Methylmalonyl CoA decarboxylase    Escherichia coli GO:  catalytic activity    metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1ef8_A_6 - HA => SUBCLASS : 2.3.1
1ef8_A_180 - EH => SUBCLASS : 1.1.1
1ef8_A_180 - EH => SUBCLASS : 1.1.18
1ef8_A_128 - EH => SUBCLASS : 1.1.44
1ef8_A_128 - EH => SUBCLASS : 1.1.51
1ef8_A_106 - EH => SUBCLASS : 1.2.3
1ef8_A_106 - EH => SUBCLASS : 1.2.10
1ef8_A_99 - AR => SUBCLASS : 1.3.3
1ef8_A_50 - AR => SUBCLASS : 3.6.2
1ef8_A_120 - AR => SUBCLASS : 3.7.1
1ef8_A_224 - HH => SUBCLASS : 1.1.1
1ef8_A_184 - HH => SUBCLASS : 2.1.2
1ef8_A_133 - HH => SUBCLASS : 5.1.2

Loops in ArchDB95 clusters

1ef8_A_180 - EH => SUBCLASS : 1.1.1
1ef8_A_180 - EH => SUBCLASS : 1.1.17
1ef8_A_128 - EH => SUBCLASS : 1.1.67
1ef8_A_106 - EH => SUBCLASS : 1.3.6
1ef8_A_99 - AR => SUBCLASS : 1.3.3
1ef8_A_120 - AR => SUBCLASS : 2.2.1
1ef8_A_224 - HH => SUBCLASS : 1.1.2
1ef8_A_184 - HH => SUBCLASS : 2.1.1
1ef8_A_184 - HH => SUBCLASS : 2.1.2
1ef8_A_133 - HH => SUBCLASS : 5.1.3
1ef8_A_133 - HH => SUBCLASS : 5.4.2
1ef8_A_154 - HE => SUBCLASS : 2.1.7
1ef8_A_110 - HE => SUBCLASS : 2.2.1
1ef8_A_84 - HE => SUBCLASS : 2.2.6
1ef8_A_169 - HE => SUBCLASS : 4.2.3
1ef8_A_84 - HE => SUBCLASS : 4.3.1
1ef8_A_6 - HA => SUBCLASS : 2.3.1

Loops not clustered in ArchDB

1ef8_A_14 - EH
1ef8_A_61 - EH
1ef8_A_167 - EH
1ef8_A_30 - HE
1ef8_A_142 - HH
1ef8_A_203 - HH

1ef8 A - percentage of sequence identity: 100
1ef8 B - percentage of sequence identity: 100
1ef8 C - percentage of sequence identity: 100
1ef9 A - percentage of sequence identity: 100