PDB: 1ex0 Compound: coagulation factor xiii a chain Classification: TRANSFERASE Entry date in PDB: 2003-12-23 Resolution [Å]: 2.00 R-Factor: 0.187

CHAIN: A SWISS-PROT/TREMBL: P00488    KEYWORD: 3D-structure    Acetylation    Acyltransferase    Blood coagulation    Calcium-binding    Disease mutation    Plasma    Polymorphism    Transferase    Zymogen    EC: 2.3.2.13 SCOP: b.1.18.9 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    Transglutaminase N-terminal domain    Transglutaminase N-terminal domain    Human (Homo sapiens), blood isozyme SCOP: b.1.5.1 All beta proteins    Immunoglobulin-like beta-sandwich    Transglutaminase, two C-terminal domains    Transglutaminase, two C-terminal domains    Transglutaminase, two C-terminal domains    Human (Homo sapiens), blood isozyme SCOP: b.1.5.1 All beta proteins    Immunoglobulin-like beta-sandwich    Transglutaminase, two C-terminal domains    Transglutaminase, two C-terminal domains    Transglutaminase, two C-terminal domains    Human (Homo sapiens), blood isozyme SCOP: d.3.1.4 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Transglutaminase catalytic domain    Transglutaminase catalytic domain    Human (Homo sapiens), blood isozyme GO:  peptide cross-linking    CHAIN: B SWISS-PROT/TREMBL: P00488    KEYWORD: 3D-structure    Acetylation    Acyltransferase    Blood coagulation    Calcium-binding    Disease mutation    Plasma    Polymorphism    Transferase    Zymogen    EC: 2.3.2.13 SCOP: b.1.18.9 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    Transglutaminase N-terminal domain    Transglutaminase N-terminal domain    Human (Homo sapiens), blood isozyme SCOP: b.1.5.1 All beta proteins    Immunoglobulin-like beta-sandwich    Transglutaminase, two C-terminal domains    Transglutaminase, two C-terminal domains    Transglutaminase, two C-terminal domains    Human (Homo sapiens), blood isozyme SCOP: b.1.5.1 All beta proteins    Immunoglobulin-like beta-sandwich    Transglutaminase, two C-terminal domains    Transglutaminase, two C-terminal domains    Transglutaminase, two C-terminal domains    Human (Homo sapiens), blood isozyme SCOP: d.3.1.4 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Transglutaminase catalytic domain    Transglutaminase catalytic domain    Human (Homo sapiens), blood isozyme GO:  peptide cross-linking

Image Source: PDB

Loops in ArchDB40 clusters

1ex0_A_314 - HE => SUBCLASS : 2.1.1
1ex0_A_209 - HA => SUBCLASS : 2.2.1
1ex0_A_155 - HA => SUBCLASS : 2.2.16
1ex0_A_131 - HA => SUBCLASS : 2.3.1
1ex0_A_438 - HA => SUBCLASS : 3.1.1
1ex0_A_603 - HA => SUBCLASS : 4.1.2
1ex0_A_547 - HA => SUBCLASS : 5.1.2
1ex0_A_581 - EH => SUBCLASS : 1.1.3
1ex0_A_581 - EH => SUBCLASS : 1.1.8
1ex0_A_74 - AR => SUBCLASS : 2.2.1
1ex0_A_673 - AR => SUBCLASS : 3.3.1
1ex0_A_74 - AR => SUBCLASS : 3.3.3
1ex0_A_564 - AR => SUBCLASS : 3.5.4
1ex0_A_673 - AR => SUBCLASS : 3.5.4
1ex0_A_533 - AR => SUBCLASS : 3.8.1
1ex0_A_688 - AR => SUBCLASS : 4.5.2

Loops in ArchDB95 clusters

1ex0_A_581 - EH => SUBCLASS : 1.1.8
1ex0_A_581 - EH => SUBCLASS : 2.2.1
1ex0_A_74 - AR => SUBCLASS : 3.3.4
1ex0_A_564 - AR => SUBCLASS : 3.6.7
1ex0_A_673 - AR => SUBCLASS : 3.6.7
1ex0_A_688 - AR => SUBCLASS : 4.3.1
1ex0_A_533 - AR => SUBCLASS : 5.1.1
1ex0_A_428 - HE => SUBCLASS : 0.1.1
1ex0_A_314 - HE => SUBCLASS : 2.1.1
1ex0_A_155 - HA => SUBCLASS : 2.2.2
1ex0_A_155 - HA => SUBCLASS : 2.2.14
1ex0_A_131 - HA => SUBCLASS : 2.3.1
1ex0_A_438 - HA => SUBCLASS : 3.1.1
1ex0_A_603 - HA => SUBCLASS : 4.1.2
1ex0_A_547 - HA => SUBCLASS : 5.4.11
1ex0_A_391 - HA => SUBCLASS : 6.14.1

Loops not clustered in ArchDB

1ex0_A_81 - AR
1ex0_A_450 - AR
1ex0_A_618 - AR
1ex0_A_349 - AR
1ex0_A_332 - AR
1ex0_A_168 - AR
1ex0_A_141 - AR
1ex0_A_116 - AR
1ex0_A_646 - AR
1ex0_A_180 - EH
1ex0_A_219 - EH
1ex0_A_275 - EH
1ex0_A_309 - EH
1ex0_A_406 - EH
1ex0_A_474 - EH
1ex0_A_47 - EH
1ex0_A_701 - HA
1ex0_A_660 - HA
1ex0_A_99 - HA
1ex0_A_121 - HA
1ex0_A_370 - HA
1ex0_A_463 - HA
1ex0_A_518 - HA
1ex0_A_633 - HA
1ex0_A_591 - HE
1ex0_A_488 - HE
1ex0_A_296 - HE
1ex0_A_255 - HE
1ex0_A_198 - HE
1ex0_A_59 - HE
1ex0_A_234 - HH
1ex0_A_414 - HH
1ex0_A_478 - HH

1evu A - percentage of sequence identity: 99
1evu B - percentage of sequence identity: 99
1ex0 A - percentage of sequence identity: 100
1ex0 B - percentage of sequence identity: 100
1f13 A - percentage of sequence identity: 99
1f13 B - percentage of sequence identity: 99
1fie A - percentage of sequence identity: 99
1fie B - percentage of sequence identity: 99
1ggt A - percentage of sequence identity: 99
1ggt B - percentage of sequence identity: 99
1ggu A - percentage of sequence identity: 99
1ggu B - percentage of sequence identity: 99
1ggy A - percentage of sequence identity: 99
1ggy B - percentage of sequence identity: 99
1qrk A - percentage of sequence identity: 99
1qrk B - percentage of sequence identity: 99