PDB: 1f07 Compound: coenzyme f420-dependent n5,N10- methylenetetrahydr Classification: OXIDOREDUCTASE Entry date in PDB: 2001-03-14 Resolution [Å]: 2.00 R-Factor: 0.208

CHAIN: A SWISS-PROT/TREMBL: Q50744    KEYWORD: 3D-structure    Methanogenesis    One-carbon metabolism    Oxidoreductase    EC: 1.5.99.11 SCOP: c.1.16.3 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Bacterial luciferase-like    F420 dependent oxidoreductases    Coenzyme F420 dependent tetrahydromethanopterin reductase    Archaeon Methanobacterium thermoautotrophicum GO:   CHAIN: B SWISS-PROT/TREMBL: Q50744    KEYWORD: 3D-structure    Methanogenesis    One-carbon metabolism    Oxidoreductase    EC: 1.5.99.11 SCOP: c.1.16.3 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Bacterial luciferase-like    F420 dependent oxidoreductases    Coenzyme F420 dependent tetrahydromethanopterin reductase    Archaeon Methanobacterium thermoautotrophicum GO:   CHAIN: C SWISS-PROT/TREMBL: Q50744    KEYWORD: 3D-structure    Methanogenesis    One-carbon metabolism    Oxidoreductase    EC: 1.5.99.11 SCOP: c.1.16.3 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Bacterial luciferase-like    F420 dependent oxidoreductases    Coenzyme F420 dependent tetrahydromethanopterin reductase    Archaeon Methanobacterium thermoautotrophicum GO:   CHAIN: D SWISS-PROT/TREMBL: Q50744    KEYWORD: 3D-structure    Methanogenesis    One-carbon metabolism    Oxidoreductase    EC: 1.5.99.11 SCOP: c.1.16.3 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Bacterial luciferase-like    F420 dependent oxidoreductases    Coenzyme F420 dependent tetrahydromethanopterin reductase    Archaeon Methanobacterium thermoautotrophicum GO:

Image Source: PDB

Loops in ArchDB95 clusters

1f07_A_200 - EH => SUBCLASS : 2.1.7
1f07_A_148 - EH => SUBCLASS : 2.1.13
1f07_A_148 - EH => SUBCLASS : 2.1.16
1f07_A_148 - EH => SUBCLASS : 2.3.2
1f07_A_167 - EH => SUBCLASS : 4.3.1
1f07_A_2 - EH => SUBCLASS : 5.27.1
1f07_A_213 - HH => SUBCLASS : 2.1.1
1f07_A_258 - HH => SUBCLASS : 2.1.14
1f07_A_245 - HH => SUBCLASS : 2.2.13

Loops in ArchDB-EC clusters

1f07_A_233 - HH => SUBCLASS : 3.1.4

Loops not clustered in ArchDB

1f07_A_30 - EH
1f07_A_57 - EH
1f07_A_90 - EH
1f07_A_275 - EH
1f07_A_296 - EH
1f07_A_279 - HE
1f07_A_267 - HE
1f07_A_175 - HE
1f07_A_155 - HE
1f07_A_110 - HE
1f07_A_70 - HE
1f07_A_42 - HE
1f07_A_13 - HE
1f07_A_97 - HH

1f07 A - percentage of sequence identity: 100
1f07 B - percentage of sequence identity: 100
1f07 C - percentage of sequence identity: 100
1f07 D - percentage of sequence identity: 100