PDB: 1fzc Compound: fibrin Classification: BLOOD COAGULATION Entry date in PDB: 1998-10-14 Resolution [Å]: 2.30 R-Factor: 0.220

CHAIN: A SWISS-PROT/TREMBL: P02671    KEYWORD: 3D-structure    Alternative splicing    Blood coagulation    Disease mutation    Glycoprotein    Phosphorylation    Plasma    Platelet    Polymorphism    Signal    SCOP: h.1.8.1 Coiled coil proteins    Parallel coiled-coil    Fibrinogen coiled-coil and central regions    Fibrinogen coiled-coil and central regions    Fibrinogen alpha chain    Human (Homo sapiens) GO:   CHAIN: B SWISS-PROT/TREMBL: P02675    KEYWORD: 3D-structure    Blood coagulation    Disease mutation    Glycoprotein    Plasma    Platelet    Polymorphism    Pyrrolidone carboxylic acid    Signal    SCOP: d.171.1.1 Alpha and beta proteins (a+b)    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domains    Human (Homo sapiens), beta SCOP: h.1.8.1 Coiled coil proteins    Parallel coiled-coil    Fibrinogen coiled-coil and central regions    Fibrinogen coiled-coil and central regions    Fibrinogen beta chain    Human (Homo sapiens) GO:   CHAIN: C SWISS-PROT/TREMBL: P02671    KEYWORD: 3D-structure    Alternative splicing    Blood coagulation    Disease mutation    Glycoprotein    Phosphorylation    Plasma    Platelet    Polymorphism    Signal    3D-structure    Alternative splicing    Blood coagulation    Calcium    Disease mutation    Glycoprotein    Plasma    Platelet    Polymorphism    Signal    Sulfation    SCOP: d.171.1.1 Alpha and beta proteins (a+b)    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domains    Human (Homo sapiens), gamma SCOP: h.1.8.1 Coiled coil proteins    Parallel coiled-coil    Fibrinogen coiled-coil and central regions    Fibrinogen coiled-coil and central regions    Fibrinogen gamma chain    Human (Homo sapiens) GO:  fibrinogen complex    platelet activation    protein polymerization    signal transduction    CHAIN: D SWISS-PROT/TREMBL: P02671    KEYWORD: 3D-structure    Alternative splicing    Blood coagulation    Disease mutation    Glycoprotein    Phosphorylation    Plasma    Platelet    Polymorphism    Signal    SCOP: h.1.8.1 Coiled coil proteins    Parallel coiled-coil    Fibrinogen coiled-coil and central regions    Fibrinogen coiled-coil and central regions    Fibrinogen alpha chain    Human (Homo sapiens) GO:   CHAIN: E SWISS-PROT/TREMBL: P02675    KEYWORD: 3D-structure    Blood coagulation    Disease mutation    Glycoprotein    Plasma    Platelet    Polymorphism    Pyrrolidone carboxylic acid    Signal    SCOP: d.171.1.1 Alpha and beta proteins (a+b)    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domains    Human (Homo sapiens), beta SCOP: h.1.8.1 Coiled coil proteins    Parallel coiled-coil    Fibrinogen coiled-coil and central regions    Fibrinogen coiled-coil and central regions    Fibrinogen beta chain    Human (Homo sapiens) GO:   CHAIN: F SWISS-PROT/TREMBL: P02671    KEYWORD: 3D-structure    Alternative splicing    Blood coagulation    Disease mutation    Glycoprotein    Phosphorylation    Plasma    Platelet    Polymorphism    Signal    3D-structure    Alternative splicing    Blood coagulation    Calcium    Disease mutation    Glycoprotein    Plasma    Platelet    Polymorphism    Signal    Sulfation    SCOP: d.171.1.1 Alpha and beta proteins (a+b)    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domain-like    Fibrinogen C-terminal domains    Human (Homo sapiens), gamma SCOP: h.1.8.1 Coiled coil proteins    Parallel coiled-coil    Fibrinogen coiled-coil and central regions    Fibrinogen coiled-coil and central regions    Fibrinogen gamma chain    Human (Homo sapiens) GO:  fibrinogen complex    platelet activation    protein polymerization    signal transduction

Image Source: PDB

Loops in ArchDB95 clusters

1fzc_B_211 - HE => SUBCLASS : 5.54.1
1fzc_B_223 - HA => SUBCLASS : 4.2.1
1fzc_B_309 - HA => SUBCLASS : 5.1.5
1fzc_B_277 - HA => SUBCLASS : 8.1.1
1fzc_B_321 - HA => SUBCLASS : 8.6.2
1fzc_B_277 - HA => SUBCLASS : 8.10.1

Loops not clustered in ArchDB

1fzc_B_273 - AR
1fzc_B_288 - AR
1fzc_B_249 - EH
1fzc_B_292 - EH
1fzc_B_340 - EH
1fzc_B_236 - HA
1fzc_B_438 - HE
1fzc_B_296 - HE
1fzc_B_266 - HE
1fzc_B_160 - HH
1fzc_B_352 - HH
1fzc_B_362 - HH

1deq B - percentage of sequence identity: 87
1deq E - percentage of sequence identity: 87
1deq O - percentage of sequence identity: 87
1deq R - percentage of sequence identity: 87
1ei3 B - percentage of sequence identity: 74
1ei3 E - percentage of sequence identity: 74
1fid - - percentage of sequence identity: 100
1fza B - percentage of sequence identity: 100
1fza E - percentage of sequence identity: 100
1fzb B - percentage of sequence identity: 100
1fzb E - percentage of sequence identity: 100
1fzc B - percentage of sequence identity: 100
1fzc E - percentage of sequence identity: 100
1fze B - percentage of sequence identity: 100
1fze E - percentage of sequence identity: 100
1fzf B - percentage of sequence identity: 100
1fzf E - percentage of sequence identity: 100
1fzg B - percentage of sequence identity: 100
1fzg E - percentage of sequence identity: 100
1lt9 B - percentage of sequence identity: 100
1lt9 E - percentage of sequence identity: 100
1ltj B - percentage of sequence identity: 100
1ltj E - percentage of sequence identity: 100
1m1j B - percentage of sequence identity: 74
1m1j E - percentage of sequence identity: 74
1n86 B - percentage of sequence identity: 100
1n86 E - percentage of sequence identity: 100
1n8e B - percentage of sequence identity: 100
1n8e E - percentage of sequence identity: 100
1re3 B - percentage of sequence identity: 99
1re3 E - percentage of sequence identity: 99
1re4 B - percentage of sequence identity: 99
1re4 E - percentage of sequence identity: 99
1rf0 B - percentage of sequence identity: 100
1rf0 E - percentage of sequence identity: 100
1rf1 B - percentage of sequence identity: 100
1rf1 E - percentage of sequence identity: 100
null nu - percentage of sequence identity: 0