Logo
Information on 1g13
PDB: 1g13
Compound: ganglioside m2 activator protein
Classification: LIGAND BINDING PROTEIN
Entry date in PDB: 2001-04-11
Resolution [Å]: 2.00
R-Factor: 0.215


CHAIN: A
SWISS-PROT/TREMBL: P17900
   KEYWORD: 3D-structure    Disease mutation    Glycoprotein    GM2-gangliosidosis    Lysosome    Polymorphism    Signal    Sphingolipid metabolism   
SCOP: b.95.1.1 All beta proteins    Ganglioside M2 (gm2) activator    Ganglioside M2 (gm2) activator    Ganglioside M2 (gm2) activator    Ganglioside M2 (gm2) activator    Human (Homo sapiens)
GO:  


CHAIN: B
SWISS-PROT/TREMBL: P17900
   KEYWORD: 3D-structure    Disease mutation    Glycoprotein    GM2-gangliosidosis    Lysosome    Polymorphism    Signal    Sphingolipid metabolism   
SCOP: b.95.1.1 All beta proteins    Ganglioside M2 (gm2) activator    Ganglioside M2 (gm2) activator    Ganglioside M2 (gm2) activator    Ganglioside M2 (gm2) activator    Human (Homo sapiens)
GO:  


CHAIN: C
SWISS-PROT/TREMBL: P17900
   KEYWORD: 3D-structure    Disease mutation    Glycoprotein    GM2-gangliosidosis    Lysosome    Polymorphism    Signal    Sphingolipid metabolism   
SCOP: b.95.1.1 All beta proteins    Ganglioside M2 (gm2) activator    Ganglioside M2 (gm2) activator    Ganglioside M2 (gm2) activator    Ganglioside M2 (gm2) activator    Human (Homo sapiens)
GO:  
 1g13 Image
Image Source: PDB

Stored Loops of 1g13

Loops in ArchDB40 clusters

1g13_A_50 - HA => SUBCLASS : 2.1.1
1g13_A_50 - HA => SUBCLASS : 2.1.4
1g13_A_76 - EH => SUBCLASS : 2.1.21

Loops in ArchDB95 clusters

1g13_A_76 - EH => SUBCLASS : 2.1.18
1g13_A_50 - HA => SUBCLASS : 2.1.4

Loops not clustered in ArchDB

1g13_A_4 - AR
1g13_A_112 - AR
1g13_A_62 - AR
1g13_A_40 - AR
1g13_A_32 - AR
1g13_A_27 - AR
1g13_A_21 - AR
1g13_A_15 - AR
1g13_A_119 - EH
1g13_A_135 - HA
1g13_A_80 - HE
1g13_A_130 - HE

Homologous structures to 1g13 classified in ArchDB

1g13 A - percentage of sequence identity: 100
1g13 B - percentage of sequence identity: 100
1g13 C - percentage of sequence identity: 100
1pu5 A - percentage of sequence identity: 98
1pu5 B - percentage of sequence identity: 98
1pu5 C - percentage of sequence identity: 98
1pub A - percentage of sequence identity: 100
1tjj A - percentage of sequence identity: 98
1tjj B - percentage of sequence identity: 98
1tjj C - percentage of sequence identity: 98
2af9 A - percentage of sequence identity: 98
2ag2 A - percentage of sequence identity: 98
2ag2 B - percentage of sequence identity: 98
2ag2 C - percentage of sequence identity: 98
2ag4 A - percentage of sequence identity: 98
2ag4 B - percentage of sequence identity: 98
2ag9 A - percentage of sequence identity: 98
2ag9 B - percentage of sequence identity: 98
2agc A - percentage of sequence identity: 74