PDB: 1g38 Compound: modification methylase taqi Classification: TRANSFERASE/DNA Entry date in PDB: 2001-03-05 Resolution [Å]: 2.00 R-Factor: 0.196

CHAIN: A SWISS-PROT/TREMBL: P14385    KEYWORD: 3D-structure    Methyltransferase    Restriction system    Transferase    EC: 2.1.1.72 SCOP: c.66.1.27 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    DNA methylase TaqI    DNA methylase TaqI    Thermus aquaticus GO:  DNA binding    N-methyltransferase activity    S-adenosylmethionine-dependent methyltransferase activity    DNA methylation    CHAIN: D SWISS-PROT/TREMBL: P14385    KEYWORD: 3D-structure    Methyltransferase    Restriction system    Transferase    EC: 2.1.1.72 SCOP: c.66.1.27 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    DNA methylase TaqI    DNA methylase TaqI    Thermus aquaticus GO:  DNA binding    N-methyltransferase activity    S-adenosylmethionine-dependent methyltransferase activity    DNA methylation

Image Source: PDB

Loops in ArchDB40 clusters

1g38_A_248 - HE => SUBCLASS : 0.1.10
1g38_A_215 - HA => SUBCLASS : 2.2.47
1g38_A_298 - HA => SUBCLASS : 2.6.1
1g38_A_42 - EH => SUBCLASS : 5.6.2
1g38_A_404 - AR => SUBCLASS : 3.4.1
1g38_A_289 - AR => SUBCLASS : 3.4.8
1g38_A_356 - AR => SUBCLASS : 3.5.1
1g38_A_368 - HH => SUBCLASS : 1.1.5

Loops in ArchDB95 clusters

1g38_A_42 - EH => SUBCLASS : 5.11.2
1g38_A_356 - AR => SUBCLASS : 1.1.1
1g38_A_404 - AR => SUBCLASS : 3.2.4
1g38_A_289 - AR => SUBCLASS : 3.2.10
1g38_A_404 - AR => SUBCLASS : 4.8.8
1g38_A_368 - HH => SUBCLASS : 1.1.3
1g38_A_248 - HE => SUBCLASS : 0.1.14
1g38_A_298 - HA => SUBCLASS : 2.4.1

Loops in ArchDB-EC clusters

1g38_A_368 - HH => SUBCLASS : 1.1.5

Loops not clustered in ArchDB

1g38_A_404 - AR
1g38_A_203 - AR
1g38_A_302 - AR
1g38_A_313 - AR
1g38_A_343 - AR
1g38_A_84 - AR
1g38_A_203 - AR
1g38_A_289 - AR
1g38_A_302 - AR
1g38_A_313 - AR
1g38_A_343 - AR
1g38_A_356 - AR
1g38_A_84 - AR
1g38_A_99 - EH
1g38_A_364 - EH
1g38_A_263 - EH
1g38_A_258 - EH
1g38_A_226 - EH
1g38_A_153 - EH
1g38_A_186 - HA
1g38_A_186 - HA
1g38_A_66 - HA
1g38_A_298 - HA
1g38_A_330 - HA
1g38_A_66 - HA
1g38_A_330 - HA
1g38_A_215 - HA
1g38_A_25 - HE
1g38_A_52 - HE
1g38_A_142 - HE
1g38_A_175 - HE
1g38_A_260 - HE
1g38_A_272 - HE
1g38_A_397 - HE
1g38_A_378 - HH
1g38_A_123 - HH

1aqi A - percentage of sequence identity: 99
1aqi B - percentage of sequence identity: 99
1aqj A - percentage of sequence identity: 100
1aqj B - percentage of sequence identity: 100
1g38 A - percentage of sequence identity: 100
1g38 D - percentage of sequence identity: 100
2adm A - percentage of sequence identity: 99
2adm B - percentage of sequence identity: 99