PDB: 1gc0 Compound: methionine gamma-lyase Classification: LYASE Entry date in PDB: 2002-05-08 Resolution [Å]: 1.70 R-Factor: 0.210

CHAIN: A SWISS-PROT/TREMBL: P13254    KEYWORD: 3D-structure    Lyase    Pyridoxal phosphate    EC: 4.4.1.11 SCOP: c.67.1.3 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    Cystathionine synthase-like    Methionine gamma-lyase, MGL    Pseudomonas putida GO:  methionine gamma-lyase activity    amino acid metabolism    CHAIN: B SWISS-PROT/TREMBL: P13254    KEYWORD: 3D-structure    Lyase    Pyridoxal phosphate    EC: 4.4.1.11 SCOP: c.67.1.3 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    Cystathionine synthase-like    Methionine gamma-lyase, MGL    Pseudomonas putida GO:  methionine gamma-lyase activity    amino acid metabolism    CHAIN: C SWISS-PROT/TREMBL: P13254    KEYWORD: 3D-structure    Lyase    Pyridoxal phosphate    EC: 4.4.1.11 SCOP: c.67.1.3 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    Cystathionine synthase-like    Methionine gamma-lyase, MGL    Pseudomonas putida GO:  methionine gamma-lyase activity    amino acid metabolism    CHAIN: D SWISS-PROT/TREMBL: P13254    KEYWORD: 3D-structure    Lyase    Pyridoxal phosphate    EC: 4.4.1.11 SCOP: c.67.1.3 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    Cystathionine synthase-like    Methionine gamma-lyase, MGL    Pseudomonas putida GO:  methionine gamma-lyase activity    amino acid metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1gc0_A_169 - HE => SUBCLASS : 1.1.7
1gc0_A_169 - HE => SUBCLASS : 1.1.12
1gc0_A_116 - HE => SUBCLASS : 2.1.11
1gc0_A_262 - HE => SUBCLASS : 3.3.1
1gc0_A_321 - HE => SUBCLASS : 3.4.2
1gc0_A_65 - HE => SUBCLASS : 3.9.1
1gc0_A_321 - HE => SUBCLASS : 4.5.1
1gc0_A_140 - HE => SUBCLASS : 4.8.1
1gc0_A_89 - HE => SUBCLASS : 5.2.1
1gc0_A_82 - EH => SUBCLASS : 0.1.1
1gc0_A_131 - EH => SUBCLASS : 4.1.1
1gc0_A_373 - EH => SUBCLASS : 5.24.1

Loops in ArchDB95 clusters

1gc0_A_313 - EH => SUBCLASS : 0.1.65
1gc0_A_82 - EH => SUBCLASS : 2.1.4
1gc0_A_131 - EH => SUBCLASS : 4.1.1
1gc0_A_131 - EH => SUBCLASS : 4.1.2
1gc0_A_373 - EH => SUBCLASS : 5.27.1
1gc0_A_116 - HE => SUBCLASS : 2.1.13
1gc0_A_321 - HE => SUBCLASS : 3.4.1
1gc0_A_169 - HE => SUBCLASS : 3.5.2
1gc0_A_262 - HE => SUBCLASS : 3.6.1
1gc0_A_321 - HE => SUBCLASS : 3.6.2
1gc0_A_65 - HE => SUBCLASS : 3.9.1
1gc0_A_140 - HE => SUBCLASS : 4.13.1
1gc0_A_89 - HE => SUBCLASS : 5.4.1
1gc0_A_361 - HE => SUBCLASS : 5.60.1

Loops in ArchDB-EC clusters

1gc0_A_89 - HE => SUBCLASS : 5.1.1

Loops not clustered in ArchDB

1gc0_A_106 - EH
1gc0_A_151 - EH
1gc0_A_182 - EH
1gc0_A_222 - EH
1gc0_A_347 - EH
1gc0_A_286 - HA
1gc0_A_336 - HA
1gc0_A_204 - HA
1gc0_A_286 - HA
1gc0_A_204 - HA
1gc0_A_336 - HA
1gc0_A_191 - HE
1gc0_A_249 - HH
1gc0_A_228 - HH
1gc0_A_10 - HH
1gc0_A_238 - HH

1gc0 A - percentage of sequence identity: 100
1gc0 B - percentage of sequence identity: 100
1gc0 C - percentage of sequence identity: 100
1gc0 D - percentage of sequence identity: 100
1gc2 A - percentage of sequence identity: 100
1gc2 B - percentage of sequence identity: 100
1gc2 C - percentage of sequence identity: 100
1gc2 D - percentage of sequence identity: 100
1pg8 A - percentage of sequence identity: 100
1pg8 B - percentage of sequence identity: 100
1pg8 C - percentage of sequence identity: 100
1pg8 D - percentage of sequence identity: 100
1ukj A - percentage of sequence identity: 100
1ukj B - percentage of sequence identity: 100
1ukj C - percentage of sequence identity: 100
1ukj D - percentage of sequence identity: 100