PDB: 1geh Compound: ribulose-1,5-bisphosphate carboxylaseOXYGENASE Classification: LYASE Entry date in PDB: 2001-12-19 Resolution [Å]: 2.80 R-Factor: 0.224

CHAIN: A SWISS-PROT/TREMBL: O93627    KEYWORD: 3D-structure    Lyase    Magnesium    Metal-binding    Monooxygenase    Oxidoreductase    EC: 4.1.1.39 SCOP: c.1.14.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    RuBisCo, C-terminal domain    RuBisCo, large subunit, C-terminal domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis SCOP: d.58.9.1 Alpha and beta proteins (a+b)    Ferredoxin-like    RuBisCO, large subunit, small (N-terminal) domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis GO:  ribulose bisphosphate carboxylase complex (sensu Magnoliophyta)    ribulose-bisphosphate carboxylase activity    carbon utilization by fixation of carbon dioxide    CHAIN: B SWISS-PROT/TREMBL: O93627    KEYWORD: 3D-structure    Lyase    Magnesium    Metal-binding    Monooxygenase    Oxidoreductase    EC: 4.1.1.39 SCOP: c.1.14.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    RuBisCo, C-terminal domain    RuBisCo, large subunit, C-terminal domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis SCOP: d.58.9.1 Alpha and beta proteins (a+b)    Ferredoxin-like    RuBisCO, large subunit, small (N-terminal) domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis GO:  ribulose bisphosphate carboxylase complex (sensu Magnoliophyta)    ribulose-bisphosphate carboxylase activity    carbon utilization by fixation of carbon dioxide    CHAIN: C SWISS-PROT/TREMBL: O93627    KEYWORD: 3D-structure    Lyase    Magnesium    Metal-binding    Monooxygenase    Oxidoreductase    EC: 4.1.1.39 SCOP: c.1.14.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    RuBisCo, C-terminal domain    RuBisCo, large subunit, C-terminal domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis SCOP: d.58.9.1 Alpha and beta proteins (a+b)    Ferredoxin-like    RuBisCO, large subunit, small (N-terminal) domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis GO:  ribulose bisphosphate carboxylase complex (sensu Magnoliophyta)    ribulose-bisphosphate carboxylase activity    carbon utilization by fixation of carbon dioxide    CHAIN: D SWISS-PROT/TREMBL: O93627    KEYWORD: 3D-structure    Lyase    Magnesium    Metal-binding    Monooxygenase    Oxidoreductase    EC: 4.1.1.39 SCOP: c.1.14.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    RuBisCo, C-terminal domain    RuBisCo, large subunit, C-terminal domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis SCOP: d.58.9.1 Alpha and beta proteins (a+b)    Ferredoxin-like    RuBisCO, large subunit, small (N-terminal) domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis GO:  ribulose bisphosphate carboxylase complex (sensu Magnoliophyta)    ribulose-bisphosphate carboxylase activity    carbon utilization by fixation of carbon dioxide    CHAIN: E SWISS-PROT/TREMBL: O93627    KEYWORD: 3D-structure    Lyase    Magnesium    Metal-binding    Monooxygenase    Oxidoreductase    EC: 4.1.1.39 SCOP: c.1.14.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    RuBisCo, C-terminal domain    RuBisCo, large subunit, C-terminal domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis SCOP: d.58.9.1 Alpha and beta proteins (a+b)    Ferredoxin-like    RuBisCO, large subunit, small (N-terminal) domain    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Ribulose 1,5-bisphosphate carboxylase-oxygenase    Archaeon Thermococcus kodakaraensis GO:  ribulose bisphosphate carboxylase complex (sensu Magnoliophyta)    ribulose-bisphosphate carboxylase activity    carbon utilization by fixation of carbon dioxide

Image Source: PDB

Loops in ArchDB-EC clusters

1geh_A_130 - HH => SUBCLASS : 7.10.1

Loops not clustered in ArchDB

1geh_A_354 - AR
1geh_A_277 - AR
1geh_A_118 - AR
1geh_A_24 - EH
1geh_A_387 - EH
1geh_A_363 - EH
1geh_A_312 - EH
1geh_A_295 - EH
1geh_A_251 - EH
1geh_A_157 - EH
1geh_A_122 - EH
1geh_A_85 - EH
1geh_A_187 - EH
1geh_A_225 - EH
1geh_A_341 - HA
1geh_A_73 - HA
1geh_A_375 - HE
1geh_A_326 - HE
1geh_A_298 - HE
1geh_A_261 - HE
1geh_A_64 - HE
1geh_A_101 - HE
1geh_A_142 - HE
1geh_A_170 - HE
1geh_A_202 - HE
1geh_A_234 - HE
1geh_A_401 - HH
1geh_A_392 - HH
1geh_A_256 - HH
1geh_A_39 - HH
1geh_A_421 - HH

1geh A - percentage of sequence identity: 100
1geh B - percentage of sequence identity: 100
1geh C - percentage of sequence identity: 100
1geh D - percentage of sequence identity: 100
1geh E - percentage of sequence identity: 100