PDB: 1gpe Compound: glucose oxidase Classification: OXIDOREDUCTASE(FLAVOPROTEIN) Entry date in PDB: 1999-05-06 Resolution [Å]: 1.80 R-Factor: 0.164

CHAIN: A SWISS-PROT/TREMBL: P81156    KEYWORD: 3D-structure    FAD    Flavoprotein    Glycoprotein    Oxidoreductase    EC: 1.1.3.4 SCOP: c.3.1.2 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD-linked reductases, N-terminal domain    Glucose oxidase    Penicillium amagasakiense SCOP: c.3.1.2 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD-linked reductases, N-terminal domain    Glucose oxidase    Penicillium amagasakiense SCOP: d.16.1.1 Alpha and beta proteins (a+b)    FAD-linked reductases, C-terminal domain    FAD-linked reductases, C-terminal domain    GMC oxidoreductases    Glucose oxidase    Penicillium amagasakiense GO:  FAD binding    oxidoreductase activity    oxidoreductase activity, acting on CH-OH group of donors    electron transport    CHAIN: B SWISS-PROT/TREMBL: P81156    KEYWORD: 3D-structure    FAD    Flavoprotein    Glycoprotein    Oxidoreductase    EC: 1.1.3.4 SCOP: c.3.1.2 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD-linked reductases, N-terminal domain    Glucose oxidase    Penicillium amagasakiense SCOP: c.3.1.2 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD-linked reductases, N-terminal domain    Glucose oxidase    Penicillium amagasakiense SCOP: d.16.1.1 Alpha and beta proteins (a+b)    FAD-linked reductases, C-terminal domain    FAD-linked reductases, C-terminal domain    GMC oxidoreductases    Glucose oxidase    Penicillium amagasakiense GO:  FAD binding    oxidoreductase activity    oxidoreductase activity, acting on CH-OH group of donors    electron transport

Image Source: PDB

Loops in ArchDB40 clusters

1gpe_A_484 - HE => SUBCLASS : 0.1.6
1gpe_A_137 - HE => SUBCLASS : 0.1.13
1gpe_A_298 - HE => SUBCLASS : 1.3.3
1gpe_A_298 - HE => SUBCLASS : 1.3.6
1gpe_A_393 - HE => SUBCLASS : 4.32.1
1gpe_A_34 - HE => SUBCLASS : 5.4.1
1gpe_A_253 - HA => SUBCLASS : 3.8.1
1gpe_A_24 - EH => SUBCLASS : 3.2.1
1gpe_A_114 - EH => SUBCLASS : 3.3.1
1gpe_A_148 - EH => SUBCLASS : 3.3.7
1gpe_A_148 - EH => SUBCLASS : 3.8.5
1gpe_A_246 - AR => SUBCLASS : 2.2.3
1gpe_A_358 - HH => SUBCLASS : 1.5.2
1gpe_A_377 - HH => SUBCLASS : 5.5.1

Loops in ArchDB95 clusters

1gpe_A_148 - EH => SUBCLASS : 3.1.5
1gpe_A_114 - EH => SUBCLASS : 3.1.6
1gpe_A_148 - EH => SUBCLASS : 3.1.9
1gpe_A_114 - EH => SUBCLASS : 3.1.13
1gpe_A_24 - EH => SUBCLASS : 3.5.1
1gpe_A_246 - AR => SUBCLASS : 2.5.2
1gpe_A_377 - HH => SUBCLASS : 5.6.1
1gpe_A_484 - HE => SUBCLASS : 0.1.6
1gpe_A_137 - HE => SUBCLASS : 0.1.68
1gpe_A_298 - HE => SUBCLASS : 1.1.3
1gpe_A_34 - HE => SUBCLASS : 3.4.2
1gpe_A_34 - HE => SUBCLASS : 5.14.1
1gpe_A_253 - HA => SUBCLASS : 2.2.2

Loops in ArchDB-EC clusters

1gpe_A_377 - HH => SUBCLASS : 5.6.2

Loops not clustered in ArchDB

1gpe_A_516 - AR
1gpe_A_215 - AR
1gpe_A_322 - AR
1gpe_A_334 - AR
1gpe_A_424 - AR
1gpe_A_516 - AR
1gpe_A_97 - AR
1gpe_A_215 - AR
1gpe_A_246 - AR
1gpe_A_322 - AR
1gpe_A_334 - AR
1gpe_A_424 - AR
1gpe_A_97 - AR
1gpe_A_51 - EH
1gpe_A_548 - EH
1gpe_A_452 - EH
1gpe_A_351 - EH
1gpe_A_307 - EH
1gpe_A_487 - EH
1gpe_A_279 - EH
1gpe_A_220 - EH
1gpe_A_175 - EH
1gpe_A_265 - HA
1gpe_A_413 - HA
1gpe_A_85 - HA
1gpe_A_439 - HA
1gpe_A_253 - HA
1gpe_A_439 - HA
1gpe_A_413 - HA
1gpe_A_85 - HA
1gpe_A_265 - HA
1gpe_A_504 - HE
1gpe_A_232 - HE
1gpe_A_189 - HE
1gpe_A_155 - HE
1gpe_A_65 - HE
1gpe_A_310 - HE
1gpe_A_462 - HH
1gpe_A_366 - HH
1gpe_A_120 - HH

1cf3 A - percentage of sequence identity: 65
1gal - - percentage of sequence identity: 65
1gpe A - percentage of sequence identity: 100
1gpe B - percentage of sequence identity: 100