PDB: 1i32 Compound: glyceraldehyde 3-phosphate dehydrogenase Classification: OXIDOREDUCTASE Entry date in PDB: 2001-10-03 Resolution [Å]: 2.60 R-Factor: 0.205

CHAIN: A SWISS-PROT/TREMBL: Q27890    KEYWORD: 3D-structure    Glycolysis    Glycosome    NAD    Oxidoreductase    EC: 1.2.1.12 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: d.81.1.1 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    GAPDH-like    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana GO:  glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity    glyceraldehyde-3-phosphate dehydrogenase activity    NAD binding    glucose metabolism    glycolysis    CHAIN: B SWISS-PROT/TREMBL: Q27890    KEYWORD: 3D-structure    Glycolysis    Glycosome    NAD    Oxidoreductase    EC: 1.2.1.12 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: d.81.1.1 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    GAPDH-like    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana GO:  glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity    glyceraldehyde-3-phosphate dehydrogenase activity    NAD binding    glucose metabolism    glycolysis    CHAIN: C SWISS-PROT/TREMBL: Q27890    KEYWORD: 3D-structure    Glycolysis    Glycosome    NAD    Oxidoreductase    EC: 1.2.1.12 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: d.81.1.1 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    GAPDH-like    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana GO:  glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity    glyceraldehyde-3-phosphate dehydrogenase activity    NAD binding    glucose metabolism    glycolysis    CHAIN: D SWISS-PROT/TREMBL: Q27890    KEYWORD: 3D-structure    Glycolysis    Glycosome    NAD    Oxidoreductase    EC: 1.2.1.12 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: d.81.1.1 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    GAPDH-like    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana GO:  glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity    glyceraldehyde-3-phosphate dehydrogenase activity    NAD binding    glucose metabolism    glycolysis    CHAIN: E SWISS-PROT/TREMBL: Q27890    KEYWORD: 3D-structure    Glycolysis    Glycosome    NAD    Oxidoreductase    EC: 1.2.1.12 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: d.81.1.1 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    GAPDH-like    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana GO:  glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity    glyceraldehyde-3-phosphate dehydrogenase activity    NAD binding    glucose metabolism    glycolysis    CHAIN: F SWISS-PROT/TREMBL: Q27890    KEYWORD: 3D-structure    Glycolysis    Glycosome    NAD    Oxidoreductase    EC: 1.2.1.12 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana SCOP: d.81.1.1 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    GAPDH-like    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)    Leishmania mexicana GO:  glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity    glyceraldehyde-3-phosphate dehydrogenase activity    NAD binding    glucose metabolism    glycolysis

Image Source: PDB

Loops in ArchDB-EC clusters

1i32_A_228 - HE => SUBCLASS : 7.6.1

Loops not clustered in ArchDB

1i32_A_130 - AR
1i32_A_188 - AR
1i32_A_243 - AR
1i32_A_3 - EH
1i32_A_326 - EH
1i32_A_308 - EH
1i32_A_256 - EH
1i32_A_222 - EH
1i32_A_160 - EH
1i32_A_106 - EH
1i32_A_83 - EH
1i32_A_31 - EH
1i32_A_142 - HA
1i32_A_77 - HA
1i32_A_63 - HA
1i32_A_289 - HA
1i32_A_312 - HE
1i32_A_270 - HE
1i32_A_166 - HE
1i32_A_99 - HE
1i32_A_43 - HE
1i32_A_12 - HE
1i32_A_122 - HE
1i32_A_117 - HH

1a7k A - percentage of sequence identity: 100
1a7k B - percentage of sequence identity: 100
1a7k C - percentage of sequence identity: 100
1a7k D - percentage of sequence identity: 100
1gga A - percentage of sequence identity: 81
1gga B - percentage of sequence identity: 81
1gga O - percentage of sequence identity: 81
1gga P - percentage of sequence identity: 81
1gga Q - percentage of sequence identity: 81
1gga R - percentage of sequence identity: 81
1gyp A - percentage of sequence identity: 100
1gyp B - percentage of sequence identity: 100
1gyp C - percentage of sequence identity: 100
1gyp D - percentage of sequence identity: 100
1gyq A - percentage of sequence identity: 100
1gyq B - percentage of sequence identity: 100
1gyq C - percentage of sequence identity: 100
1gyq D - percentage of sequence identity: 100
1i32 A - percentage of sequence identity: 100
1i32 B - percentage of sequence identity: 100
1i32 C - percentage of sequence identity: 100
1i32 D - percentage of sequence identity: 100
1i32 E - percentage of sequence identity: 100
1i32 F - percentage of sequence identity: 100
1i33 A - percentage of sequence identity: 100
1i33 B - percentage of sequence identity: 100
1i33 C - percentage of sequence identity: 100
1i33 D - percentage of sequence identity: 100
1i33 E - percentage of sequence identity: 100
1i33 F - percentage of sequence identity: 100
1k3t A - percentage of sequence identity: 84
1k3t B - percentage of sequence identity: 84
1k3t C - percentage of sequence identity: 84
1k3t D - percentage of sequence identity: 84
1ml3 A - percentage of sequence identity: 84
1ml3 B - percentage of sequence identity: 84
1ml3 C - percentage of sequence identity: 84
1ml3 D - percentage of sequence identity: 84
1qxs A - percentage of sequence identity: 84
1qxs B - percentage of sequence identity: 84
1qxs C - percentage of sequence identity: 84
1qxs D - percentage of sequence identity: 84