PDB: 1ign Compound: rap1 Classification: COMPLEX (DNA-BINDING PROTEIN/DNA) Entry date in PDB: 1997-01-27 Resolution [Å]: 2.25 R-Factor: 0.219

CHAIN: A SWISS-PROT/TREMBL: P11938    KEYWORD: 3D-structure    Activator    DNA-binding    Nuclear protein    Repressor    Telomere    Transcription regulation    SCOP: a.4.1.6 All alpha proteins    DNA/RNA-binding 3-helical bundle    Homeodomain-like    DNA-binding domain of rap1    DNA-binding domain of rap1    Baker's yeast (Saccharomyces cerevisiae) SCOP: a.4.1.6 All alpha proteins    DNA/RNA-binding 3-helical bundle    Homeodomain-like    DNA-binding domain of rap1    DNA-binding domain of rap1    Baker's yeast (Saccharomyces cerevisiae) GO:  intracellular    nucleus    DNA binding    regulation of transcription    CHAIN: B SWISS-PROT/TREMBL: P11938    KEYWORD: 3D-structure    Activator    DNA-binding    Nuclear protein    Repressor    Telomere    Transcription regulation    SCOP: a.4.1.6 All alpha proteins    DNA/RNA-binding 3-helical bundle    Homeodomain-like    DNA-binding domain of rap1    DNA-binding domain of rap1    Baker's yeast (Saccharomyces cerevisiae) SCOP: a.4.1.6 All alpha proteins    DNA/RNA-binding 3-helical bundle    Homeodomain-like    DNA-binding domain of rap1    DNA-binding domain of rap1    Baker's yeast (Saccharomyces cerevisiae) GO:  intracellular    nucleus    DNA binding    regulation of transcription

Image Source: PDB

Loops in ArchDB40 clusters

1ign_A_386 - HH => SUBCLASS : 5.10.1
1ign_A_525 - HH => SUBCLASS : 5.10.2

Loops in ArchDB95 clusters

1ign_A_386 - HH => SUBCLASS : 5.15.1
1ign_A_525 - HH => SUBCLASS : 5.15.1

Loops not clustered in ArchDB

1ign_A_437 - EH
1ign_A_418 - HA
1ign_A_400 - HE
1ign_A_365 - HH
1ign_A_451 - HH
1ign_A_538 - HH
1ign_A_549 - HH

1ign A - percentage of sequence identity: 100
1ign B - percentage of sequence identity: 100