PDB: 1j58 Compound: yvrk protein Classification: METAL BINDING PROTEIN Entry date in PDB: 2002-07-03 Resolution [Å]: 1.75 R-Factor: 0.176

CHAIN: A SWISS-PROT/TREMBL: O34714    KEYWORD: 3D-structure    Complete proteome    Decarboxylase    Lyase    Manganese    EC: 4.1.1.2 SCOP: b.82.1.2 All beta proteins    Double-stranded beta-helix    RmlC-like cupins    Germin/Seed storage 7S protein    Oxalate decarboxylase OxdC (YvrK)    Bacillus subtilis GO:  nutrient reservoir activity

Image Source: PDB

Loops in ArchDB40 clusters

1j58_A_236 - HA => SUBCLASS : 2.2.6
1j58_A_11 - HA => SUBCLASS : 2.3.8
1j58_A_293 - HA => SUBCLASS : 2.4.4
1j58_A_58 - HA => SUBCLASS : 2.5.2
1j58_A_107 - HA => SUBCLASS : 3.1.1
1j58_A_91 - AR => SUBCLASS : 1.1.2
1j58_A_91 - AR => SUBCLASS : 3.2.4
1j58_A_130 - AR => SUBCLASS : 3.3.2
1j58_A_273 - AR => SUBCLASS : 4.3.1
1j58_A_273 - AR => SUBCLASS : 5.33.1
1j58_A_168 - HH => SUBCLASS : 2.1.1

Loops in ArchDB95 clusters

1j58_A_280 - AR => SUBCLASS : 1.3.4
1j58_A_273 - AR => SUBCLASS : 2.2.1
1j58_A_130 - AR => SUBCLASS : 2.3.1
1j58_A_91 - AR => SUBCLASS : 3.1.9
1j58_A_130 - AR => SUBCLASS : 3.6.1
1j58_A_168 - HH => SUBCLASS : 2.1.1
1j58_A_354 - HH => SUBCLASS : 3.1.1
1j58_A_354 - HH => SUBCLASS : 3.1.15
1j58_A_236 - HA => SUBCLASS : 2.2.7
1j58_A_11 - HA => SUBCLASS : 2.3.9
1j58_A_293 - HA => SUBCLASS : 2.5.2
1j58_A_107 - HA => SUBCLASS : 3.1.1
1j58_A_58 - HA => SUBCLASS : 3.11.1

Loops in ArchDB-EC clusters

1j58_A_354 - HH => SUBCLASS : 3.3.14

Loops not clustered in ArchDB

1j58_A_310 - AR
1j58_A_305 - AR
1j58_A_310 - AR
1j58_A_329 - AR
1j58_A_91 - AR
1j58_A_63 - AR
1j58_A_80 - AR
1j58_A_101 - AR
1j58_A_130 - AR
1j58_A_140 - AR
1j58_A_153 - AR
1j58_A_227 - AR
1j58_A_329 - AR
1j58_A_258 - AR
1j58_A_273 - AR
1j58_A_280 - AR
1j58_A_299 - AR
1j58_A_305 - AR
1j58_A_299 - AR
1j58_A_288 - AR
1j58_A_288 - AR
1j58_A_101 - AR
1j58_A_63 - AR
1j58_A_140 - AR
1j58_A_80 - AR
1j58_A_153 - AR
1j58_A_227 - AR
1j58_A_258 - AR
1j58_A_343 - EH
1j58_A_165 - EH
1j58_A_15 - EH
1j58_A_201 - EH
1j58_A_293 - HA
1j58_A_241 - HA
1j58_A_67 - HA
1j58_A_241 - HA
1j58_A_58 - HA
1j58_A_67 - HA
1j58_A_121 - HA
1j58_A_11 - HA
1j58_A_107 - HA
1j58_A_121 - HA
1j58_A_236 - HA
1j58_A_25 - HE
1j58_A_177 - HE
1j58_A_210 - HE
1j58_A_345 - HH

1l3j A - percentage of sequence identity: 100
1uw8 A - percentage of sequence identity: 100