PDB: 1jqb Compound: nadp-dependent alcohol dehydrogenase Classification: OXIDOREDUCTASE Entry date in PDB: 2002-11-13 Resolution [Å]: 1.97 R-Factor: 0.219

CHAIN: A SWISS-PROT/TREMBL: P25984    KEYWORD: 3D-structure    Metal-binding    NADP    Oxidoreductase    Zinc    EC: 1.1.1.2 SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii SCOP: c.2.1.1 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Alcohol dehydrogenase-like, C-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii GO:  oxidoreductase activity    zinc ion binding    CHAIN: B SWISS-PROT/TREMBL: P25984    KEYWORD: 3D-structure    Metal-binding    NADP    Oxidoreductase    Zinc    EC: 1.1.1.2 SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii SCOP: c.2.1.1 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Alcohol dehydrogenase-like, C-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii GO:  oxidoreductase activity    zinc ion binding    CHAIN: C SWISS-PROT/TREMBL: P25984    KEYWORD: 3D-structure    Metal-binding    NADP    Oxidoreductase    Zinc    EC: 1.1.1.2 SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii SCOP: c.2.1.1 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Alcohol dehydrogenase-like, C-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii GO:  oxidoreductase activity    zinc ion binding    CHAIN: D SWISS-PROT/TREMBL: P25984    KEYWORD: 3D-structure    Metal-binding    NADP    Oxidoreductase    Zinc    EC: 1.1.1.2 SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii SCOP: b.35.1.2 All beta proteins    GroES-like    GroES-like    Alcohol dehydrogenase-like, N-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii SCOP: c.2.1.1 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Alcohol dehydrogenase-like, C-terminal domain    Bacterial secondary alcohol dehydrogenase    Clostridium beijerinckii GO:  oxidoreductase activity    zinc ion binding

Image Source: PDB

Loops in ArchDB40 clusters

1jqb_A_1002 - HA => SUBCLASS : 3.13.1
1jqb_A_1320 - EH => SUBCLASS : 1.2.17
1jqb_A_1194 - EH => SUBCLASS : 2.1.5
1jqb_A_1124 - EH => SUBCLASS : 2.6.1
1jqb_A_1170 - EH => SUBCLASS : 3.2.1
1jqb_A_1134 - EH => SUBCLASS : 5.1.4
1jqb_A_1134 - EH => SUBCLASS : 6.2.1

Loops in ArchDB95 clusters

1jqb_A_1320 - EH => SUBCLASS : 1.3.18
1jqb_A_1124 - EH => SUBCLASS : 1.4.8
1jqb_A_1194 - EH => SUBCLASS : 2.1.7
1jqb_A_1124 - EH => SUBCLASS : 2.6.1
1jqb_A_1170 - EH => SUBCLASS : 3.5.1
1jqb_A_1134 - EH => SUBCLASS : 4.2.4
1jqb_A_1134 - EH => SUBCLASS : 5.3.1
1jqb_A_1134 - EH => SUBCLASS : 6.4.2
1jqb_A_1129 - HE => SUBCLASS : 0.1.5
1jqb_A_1177 - HE => SUBCLASS : 3.1.1
1jqb_A_1201 - HE => SUBCLASS : 3.1.1
1jqb_A_1177 - HE => SUBCLASS : 4.51.1
1jqb_A_1223 - HE => SUBCLASS : 4.60.1
1jqb_A_1151 - HE => SUBCLASS : 6.4.1
1jqb_A_1298 - HE => SUBCLASS : 8.3.1
1jqb_A_1002 - HA => SUBCLASS : 3.14.1

Loops in ArchDB-EC clusters

1jqb_A_1298 - HE => SUBCLASS : 8.3.1

Loops not clustered in ArchDB

1jqb_A_1055 - AR
1jqb_A_1011 - AR
1jqb_A_1011 - AR
1jqb_A_1055 - AR
1jqb_A_1289 - EH
1jqb_A_1236 - EH
1jqb_A_1214 - EH
1jqb_A_1080 - EH
1jqb_A_1027 - EH
1jqb_A_1061 - HA
1jqb_A_1002 - HA
1jqb_A_1255 - HA
1jqb_A_1061 - HA
1jqb_A_1255 - HA
1jqb_A_1330 - HE
1jqb_A_1248 - HE
1jqb_A_1093 - HE
1jqb_A_1038 - HE
1jqb_A_1142 - HH

1bxz A - percentage of sequence identity: 76
1bxz B - percentage of sequence identity: 76
1bxz C - percentage of sequence identity: 76
1bxz D - percentage of sequence identity: 76
1jqb A - percentage of sequence identity: 100
1jqb B - percentage of sequence identity: 100
1jqb C - percentage of sequence identity: 100
1jqb D - percentage of sequence identity: 100
1kev A - percentage of sequence identity: 98
1kev B - percentage of sequence identity: 98
1kev C - percentage of sequence identity: 98
1kev D - percentage of sequence identity: 98
1ped A - percentage of sequence identity: 98
1ped B - percentage of sequence identity: 98
1ped C - percentage of sequence identity: 98
1ped D - percentage of sequence identity: 98
1y9a A - percentage of sequence identity: 62
1y9a C - percentage of sequence identity: 62
1ykf A - percentage of sequence identity: 76
1ykf B - percentage of sequence identity: 76
1ykf C - percentage of sequence identity: 76
1ykf D - percentage of sequence identity: 76