PDB: 1k1e Compound: deoxy-d-mannose-octulosonate 8-phosphate phosphata Classification: HYDROLASE Entry date in PDB: 2002-02-27 Resolution [Å]: 1.67 R-Factor: 0.178

CHAIN: A SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: B SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: C SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: D SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: E SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: F SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: G SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: H SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: I SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: J SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: K SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism    CHAIN: L SWISS-PROT/TREMBL: P45314    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Magnesium    Metal-binding    EC: 3.1.3.45 SCOP: c.108.1.5 Alpha and beta proteins (a/b)    HAD-like    HAD-like    Probable phosphatase YrbI    Probable phosphatase YrbI    Haemophilus influenzae, HI1679 GO:  3-deoxy-manno-octulosonate-8-phosphatase activity    catalytic activity    magnesium ion binding    lipopolysaccharide biosynthesis    metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1k1e_A_25 - HA => SUBCLASS : 2.2.18
1k1e_A_102 - EH => SUBCLASS : 2.1.16
1k1e_A_30 - EH => SUBCLASS : 3.3.7
1k1e_A_53 - EH => SUBCLASS : 4.11.6
1k1e_A_76 - EH => SUBCLASS : 5.8.1
1k1e_A_147 - HH => SUBCLASS : 1.3.5

Loops in ArchDB95 clusters

1k1e_A_102 - EH => SUBCLASS : 2.1.17
1k1e_A_102 - EH => SUBCLASS : 2.1.26
1k1e_A_53 - EH => SUBCLASS : 4.4.3
1k1e_A_53 - EH => SUBCLASS : 4.73.1
1k1e_A_76 - EH => SUBCLASS : 5.13.1
1k1e_A_147 - HH => SUBCLASS : 1.3.7
1k1e_A_147 - HH => SUBCLASS : 1.6.2
1k1e_A_38 - HE => SUBCLASS : 1.1.1
1k1e_A_129 - HE => SUBCLASS : 2.2.4
1k1e_A_129 - HE => SUBCLASS : 2.2.11
1k1e_A_112 - HE => SUBCLASS : 2.3.1
1k1e_A_63 - HE => SUBCLASS : 3.1.1
1k1e_A_84 - HE => SUBCLASS : 6.1.1
1k1e_A_25 - HA => SUBCLASS : 2.2.2
1k1e_A_25 - HA => SUBCLASS : 2.2.30

Loops in ArchDB-EC clusters

1k1e_A_84 - HE => SUBCLASS : 6.2.1

Loops not clustered in ArchDB

1k1e_A_10 - AR
1k1e_A_10 - AR
1k1e_A_120 - EH
1k1e_A_137 - EH
1k1e_A_25 - HA
1k1e_A_163 - HH

1j8d A - percentage of sequence identity: 100
1j8d B - percentage of sequence identity: 100
1j8d C - percentage of sequence identity: 100
1j8d D - percentage of sequence identity: 100
1k1e A - percentage of sequence identity: 100
1k1e B - percentage of sequence identity: 100
1k1e C - percentage of sequence identity: 100
1k1e D - percentage of sequence identity: 100
1k1e E - percentage of sequence identity: 100
1k1e F - percentage of sequence identity: 100
1k1e G - percentage of sequence identity: 100
1k1e H - percentage of sequence identity: 100
1k1e I - percentage of sequence identity: 100
1k1e J - percentage of sequence identity: 100
1k1e K - percentage of sequence identity: 100
1k1e L - percentage of sequence identity: 100