Logo
Information on 1kbi
PDB: 1kbi
Compound: cytochrome b2
Classification: OXIDOREDUCTASE
Entry date in PDB: 2002-04-03
Resolution [Å]: 2.30
R-Factor: 0.170


CHAIN: A


CHAIN: B
SWISS-PROT/TREMBL: P00175
   KEYWORD: 3D-structure    Electron transport    Flavoprotein    FMN    Heme    Mitochondrion    Oxidoreductase    Respiratory chain    Transit peptide   
EC: 1.1.2.3
SCOP: c.1.4.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    FMN-linked oxidoreductases    FMN-linked oxidoreductases    Flavocytochrome b2, C-terminal domain    Baker's yeast (Saccharomyces cerevisiae)
GO:  L-lactate dehydrogenase (cytochrome) activity    oxidoreductase activity    electron transport   
1kbi Image
Image Source: PDB

Stored Loops of 1kbi

Loops in ArchDB40 clusters

1kbi_A_181 - HA => SUBCLASS : 2.1.1
1kbi_A_20 - HA => SUBCLASS : 2.2.43
1kbi_A_346 - EH => SUBCLASS : 2.1.4
1kbi_A_405 - EH => SUBCLASS : 5.15.1
1kbi_A_249 - EH => SUBCLASS : 5.61.1
1kbi_A_225 - EH => SUBCLASS : 7.27.1
1kbi_A_186 - AR => SUBCLASS : 3.9.1
1kbi_A_125 - HH => SUBCLASS : 2.1.1

Loops in ArchDB95 clusters

1kbi_A_346 - EH => SUBCLASS : 2.1.2
1kbi_A_249 - EH => SUBCLASS : 4.5.1
1kbi_A_225 - EH => SUBCLASS : 7.20.1
1kbi_A_32 - EH => SUBCLASS : 11.5.1
1kbi_A_186 - AR => SUBCLASS : 3.4.1
1kbi_A_165 - AR => SUBCLASS : 13.7.1
1kbi_A_125 - HH => SUBCLASS : 2.1.1
1kbi_A_103 - HH => SUBCLASS : 9.6.1
1kbi_A_181 - HA => SUBCLASS : 2.1.1
1kbi_A_20 - HA => SUBCLASS : 2.2.12

Loops in ArchDB-EC clusters

1kbi_A_125 - HH => SUBCLASS : 2.1.16

Loops not clustered in ArchDB

1kbi_A_186 - AR
1kbi_A_165 - AR
1kbi_A_80 - EH
1kbi_A_478 - EH
1kbi_A_428 - EH
1kbi_A_367 - EH
1kbi_A_192 - EH
1kbi_A_277 - EH
1kbi_A_181 - HA
1kbi_A_24 - HA
1kbi_A_20 - HA
1kbi_A_24 - HA
1kbi_A_433 - HE
1kbi_A_415 - HE
1kbi_A_384 - HE
1kbi_A_332 - HE
1kbi_A_15 - HE
1kbi_A_70 - HE
1kbi_A_152 - HE
1kbi_A_209 - HE
1kbi_A_235 - HE
1kbi_A_259 - HE
1kbi_A_354 - HE
1kbi_A_290 - HH
1kbi_A_138 - HH
1kbi_A_59 - HH
1kbi_A_47 - HH

Homologous structures to 1kbi classified in ArchDB

1fcb A - percentage of sequence identity: 100
1fcb B - percentage of sequence identity: 100
1kbi A - percentage of sequence identity: 100
1kbi B - percentage of sequence identity: 100
1kbj A - percentage of sequence identity: 100
1kbj B - percentage of sequence identity: 100
1lco A - percentage of sequence identity: 99
1lco B - percentage of sequence identity: 99
1ldc A - percentage of sequence identity: 99
1ldc B - percentage of sequence identity: 99
1ltd A - percentage of sequence identity: 100
1ltd B - percentage of sequence identity: 100
1qcw A - percentage of sequence identity: 99
1qcw B - percentage of sequence identity: 99
1sze A - percentage of sequence identity: 99
1sze B - percentage of sequence identity: 99
1szf A - percentage of sequence identity: 99
1szf B - percentage of sequence identity: 99
1szg A - percentage of sequence identity: 99
1szg B - percentage of sequence identity: 99