ArchDB - Biological DataBase of Protein Loops

Information on 1l2i

PDB: 1l2i
Compound: estrogen receptor
Classification: TRANSCRIPTION RECEPTOR/COACTIVATOR
Entry date in PDB: 2002-05-01
Resolution [Å]: 1.95
R-Factor: 0.203

CHAIN: A

SWISS-PROT/TREMBL: P03372
   KEYWORD: 3D-structure    Alternative splicing    DNA-binding    Nuclear protein    Phosphorylation    Polymorphism    Receptor    Steroid-binding    Transcription regulation    Zinc-finger
SCOP: a.123.1.1 All alpha proteins    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Estrogen receptor alpha    Human (Homo sapiens)
GO:  nucleus    DNA binding    ligand-dependent nuclear receptor activity    steroid binding    steroid hormone receptor activity    transcription factor activity    regulation of transcription, DNA-dependent

CHAIN: B

CHAIN: C

SWISS-PROT/TREMBL: Q61026
KEYWORD: 3D-structure Activator Nuclear protein Transcription regulation
GO:

CHAIN: D

SWISS-PROT/TREMBL: Q61026
KEYWORD: 3D-structure Activator Nuclear protein Transcription regulation
GO:

Image Source: PDB

Stored Loops of 1l2i

Loops in ArchDB95 clusters

1l2i_A_421 - HH => SUBCLASS : 3.1.3
1l2i_A_470 - HH => SUBCLASS : 3.2.1
1l2i_A_372 - HE => SUBCLASS : 3.22.1
1l2i_A_401 - HA => SUBCLASS : 2.2.1

Loops not clustered in ArchDB

1l2i_A_408 - EH
1l2i_A_312 - HH
1l2i_A_339 - HH
1l2i_A_442 - HH
1l2i_A_497 - HH

Homologous structures to 1l2i classified in ArchDB

1a52 A - percentage of sequence identity: 99
1a52 B - percentage of sequence identity: 99
1ere A - percentage of sequence identity: 100
1ere B - percentage of sequence identity: 100
1ere C - percentage of sequence identity: 100
1ere D - percentage of sequence identity: 100
1ere E - percentage of sequence identity: 100
1ere F - percentage of sequence identity: 100
1err A - percentage of sequence identity: 100
1err B - percentage of sequence identity: 100
1g50 A - percentage of sequence identity: 100
1g50 B - percentage of sequence identity: 100
1g50 C - percentage of sequence identity: 100
1gwq A - percentage of sequence identity: 100
1gwq B - percentage of sequence identity: 100
1gwr A - percentage of sequence identity: 100
1gwr B - percentage of sequence identity: 100
1hj1 A - percentage of sequence identity: 60
1l2i A - percentage of sequence identity: 100
1l2i B - percentage of sequence identity: 100
1pcg A - percentage of sequence identity: 98
1pcg B - percentage of sequence identity: 98
1qkn A - percentage of sequence identity: 60
1qkt A - percentage of sequence identity: 98
1qku A - percentage of sequence identity: 100
1qku B - percentage of sequence identity: 100
1qku C - percentage of sequence identity: 100
1r5k A - percentage of sequence identity: 100
1r5k B - percentage of sequence identity: 100
1r5k C - percentage of sequence identity: 100
1sj0 A - percentage of sequence identity: 100
1uom A - percentage of sequence identity: 98
1x7e A - percentage of sequence identity: 99
1x7e B - percentage of sequence identity: 99
1x7r A - percentage of sequence identity: 99
1xp1 A - percentage of sequence identity: 100
1xp6 A - percentage of sequence identity: 100
1xp9 A - percentage of sequence identity: 100
1xpc A - percentage of sequence identity: 100
1xqc A - percentage of sequence identity: 98
1xqc B - percentage of sequence identity: 98
1xqc C - percentage of sequence identity: 98
1xqc D - percentage of sequence identity: 98
1yim A - percentage of sequence identity: 100
1yin A - percentage of sequence identity: 100
2ayr A - percentage of sequence identity: 98
2bj4 A - percentage of sequence identity: 99
2bj4 B - percentage of sequence identity: 99
3erd A - percentage of sequence identity: 100
3erd B - percentage of sequence identity: 100
3ert A - percentage of sequence identity: 100