PDB: 1lf2 Compound: plasmepsin 2 Classification: HYDROLASE Entry date in PDB: 2002-10-10 Resolution [Å]: 1.80 R-Factor: 0.195

CHAIN: A SWISS-PROT/TREMBL: P46925    KEYWORD: 3D-structure    Aspartyl protease    Glycoprotein    Hydrolase    Signal    Zymogen    EC: 3.4.23.39 SCOP: b.50.1.2 All beta proteins    Acid proteases    Acid proteases    Pepsin-like    Plasmepsin (a hemoglobin-degrading enzyme)    Plasmodium falciparum, plasmepsin II GO:  aspartic-type endopeptidase activity    pepsin A activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1lf2_A_257 - HA => SUBCLASS : 2.2.1
1lf2_A_193 - HA => SUBCLASS : 2.3.1
1lf2_A_4 - HA => SUBCLASS : 3.5.1
1lf2_A_308 - HA => SUBCLASS : 4.1.1
1lf2_A_15 - HA => SUBCLASS : 4.8.3
1lf2_A_236 - HA => SUBCLASS : 6.4.1
1lf2_A_220 - EH => SUBCLASS : 1.1.1
1lf2_A_122 - EH => SUBCLASS : 13.2.1
1lf2_A_27 - AR => SUBCLASS : 4.7.1
1lf2_A_204 - AR => SUBCLASS : 4.7.1

Loops in ArchDB95 clusters

1lf2_A_220 - EH => SUBCLASS : 1.1.1
1lf2_A_220 - EH => SUBCLASS : 1.1.2
1lf2_A_122 - EH => SUBCLASS : 13.1.1
1lf2_A_204 - AR => SUBCLASS : 5.2.1
1lf2_A_27 - AR => SUBCLASS : 5.2.1
1lf2_A_166 - AR => SUBCLASS : 7.15.1
1lf2_A_40 - AR => SUBCLASS : 23.1.1
1lf2_A_257 - HA => SUBCLASS : 2.2.1
1lf2_A_193 - HA => SUBCLASS : 2.3.1
1lf2_A_4 - HA => SUBCLASS : 3.7.1
1lf2_A_308 - HA => SUBCLASS : 4.1.1
1lf2_A_15 - HA => SUBCLASS : 4.7.2
1lf2_A_236 - HA => SUBCLASS : 6.5.1

Loops in ArchDB-EC clusters

1lf2_A_139 - HE => SUBCLASS : 4.2.2

Loops not clustered in ArchDB

1lf2_A_27 - AR
1lf2_A_289 - AR
1lf2_A_96 - AR
1lf2_A_40 - AR
1lf2_A_96 - AR
1lf2_A_166 - AR
1lf2_A_204 - AR
1lf2_A_245 - AR
1lf2_A_289 - AR
1lf2_A_245 - AR
1lf2_A_265 - EH
1lf2_A_298 - EH
1lf2_A_273 - HA
1lf2_A_308 - HA
1lf2_A_178 - HA
1lf2_A_193 - HA
1lf2_A_236 - HA
1lf2_A_257 - HA
1lf2_A_273 - HA
1lf2_A_284 - HA
1lf2_A_153 - HA
1lf2_A_67 - HA
1lf2_A_81 - HA
1lf2_A_67 - HA
1lf2_A_81 - HA
1lf2_A_284 - HA
1lf2_A_153 - HA
1lf2_A_178 - HA
1lf2_A_15 - HA
1lf2_A_4 - HA
1lf2_A_224 - HE
1lf2_A_270 - HE
1lf2_A_303 - HE

1lee A - percentage of sequence identity: 100
1lf3 A - percentage of sequence identity: 99
1lf4 A - percentage of sequence identity: 99
1ls5 A - percentage of sequence identity: 69
1ls5 B - percentage of sequence identity: 69
1m43 A - percentage of sequence identity: 100
1m43 B - percentage of sequence identity: 100
1me6 A - percentage of sequence identity: 99
1me6 B - percentage of sequence identity: 99
1miq B - percentage of sequence identity: 71
1pfz B - percentage of sequence identity: 99
1pfz C - percentage of sequence identity: 99
1pfz D - percentage of sequence identity: 99
1qs8 B - percentage of sequence identity: 71
1sme A - percentage of sequence identity: 99
1sme B - percentage of sequence identity: 99
1xdh A - percentage of sequence identity: 99
1xdh B - percentage of sequence identity: 99
1xe5 A - percentage of sequence identity: 99
1xe5 B - percentage of sequence identity: 99
1xe6 A - percentage of sequence identity: 99
1xe6 B - percentage of sequence identity: 99
2bju A - percentage of sequence identity: 99