PDB: 1pfz Compound: proplasmepsin ii Classification: ASPARTIC PROTEASE ZYMOGEN Entry date in PDB: 1999-01-13 Resolution [Å]: 1.85 R-Factor: 0.214

CHAIN: A SWISS-PROT/TREMBL: P46925    KEYWORD: 3D-structure    Aspartyl protease    Glycoprotein    Hydrolase    Signal    Zymogen    EC: 3.4.23.39 SCOP: b.50.1.2 All beta proteins    Acid proteases    Acid proteases    Pepsin-like    Plasmepsin (a hemoglobin-degrading enzyme)    Plasmodium falciparum, plasmepsin II GO:  aspartic-type endopeptidase activity    pepsin A activity    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: P46925    KEYWORD: 3D-structure    Aspartyl protease    Glycoprotein    Hydrolase    Signal    Zymogen    EC: 3.4.23.39 SCOP: b.50.1.2 All beta proteins    Acid proteases    Acid proteases    Pepsin-like    Plasmepsin (a hemoglobin-degrading enzyme)    Plasmodium falciparum, plasmepsin II GO:  aspartic-type endopeptidase activity    pepsin A activity    proteolysis and peptidolysis    CHAIN: C SWISS-PROT/TREMBL: P46925    KEYWORD: 3D-structure    Aspartyl protease    Glycoprotein    Hydrolase    Signal    Zymogen    EC: 3.4.23.39 SCOP: b.50.1.2 All beta proteins    Acid proteases    Acid proteases    Pepsin-like    Plasmepsin (a hemoglobin-degrading enzyme)    Plasmodium falciparum, plasmepsin II GO:  aspartic-type endopeptidase activity    pepsin A activity    proteolysis and peptidolysis    CHAIN: D SWISS-PROT/TREMBL: P46925    KEYWORD: 3D-structure    Aspartyl protease    Glycoprotein    Hydrolase    Signal    Zymogen    EC: 3.4.23.39 SCOP: b.50.1.2 All beta proteins    Acid proteases    Acid proteases    Pepsin-like    Plasmepsin (a hemoglobin-degrading enzyme)    Plasmodium falciparum, plasmepsin II GO:  aspartic-type endopeptidase activity    pepsin A activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB95 clusters

1pfz_A_14 - AR => SUBCLASS : 3.11.1
1pfz_A_204 - AR => SUBCLASS : 5.2.1
1pfz_A_265 - AR => SUBCLASS : 5.23.1
1pfz_A_165 - AR => SUBCLASS : 12.2.1
1pfz_A_89 - HH => SUBCLASS : 1.3.2
1pfz_A_153 - HA => SUBCLASS : 5.25.1

Loops not clustered in ArchDB

1pfz_A_21 - AR
1pfz_A_289 - AR
1pfz_A_245 - AR
1pfz_A_183 - AR
1pfz_A_40 - AR
1pfz_A_31 - AR
1pfz_A_80 - EH
1pfz_A_298 - EH
1pfz_A_220 - EH
1pfz_A_122 - EH
1pfz_A_96 - EH
1pfz_A_83 - HA
1pfz_A_308 - HA
1pfz_A_284 - HA
1pfz_A_67 - HA
1pfz_A_194 - HA
1pfz_A_236 - HA
1pfz_A_257 - HA
1pfz_A_274 - HA
1pfz_A_103 - HE
1pfz_A_112 - HE
1pfz_A_139 - HE
1pfz_A_224 - HE
1pfz_A_303 - HE

1lee A - percentage of sequence identity: 99
1lf2 A - percentage of sequence identity: 99
1lf3 A - percentage of sequence identity: 100
1lf4 A - percentage of sequence identity: 100
1ls5 A - percentage of sequence identity: 69
1ls5 B - percentage of sequence identity: 69
1m43 A - percentage of sequence identity: 99
1m43 B - percentage of sequence identity: 99
1me6 A - percentage of sequence identity: 100
1me6 B - percentage of sequence identity: 100
1miq A - percentage of sequence identity: 69
1miq B - percentage of sequence identity: 69
1pfz A - percentage of sequence identity: 100
1pfz B - percentage of sequence identity: 100
1pfz C - percentage of sequence identity: 100
1pfz D - percentage of sequence identity: 100
1qs8 A - percentage of sequence identity: 71
1qs8 B - percentage of sequence identity: 71
1sme A - percentage of sequence identity: 100
1sme B - percentage of sequence identity: 100
1xdh A - percentage of sequence identity: 100
1xdh B - percentage of sequence identity: 100
1xe5 A - percentage of sequence identity: 100
1xe5 B - percentage of sequence identity: 100
1xe6 A - percentage of sequence identity: 100
1xe6 B - percentage of sequence identity: 100
2bju A - percentage of sequence identity: 99