PDB: 1li5 Compound: cysteinyl-trna synthetase Classification: LIGASE Entry date in PDB: 2002-04-26 Resolution [Å]: 2.30 R-Factor: 0.245

CHAIN: A SWISS-PROT/TREMBL: P21888    KEYWORD: 3D-structure    Aminoacyl-tRNA synthetase    ATP-binding    Complete proteome    Ligase    Metal-binding    Protein biosynthesis    Zinc    EC: 6.1.1.16 SCOP: a.27.1.1 All alpha proteins    Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases    Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases    Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases    Cysteinyl-tRNA synthetase (CysRS)    Escherichia coli SCOP: c.26.1.1 Alpha and beta proteins (a/b)    Adenine nucleotide alpha hydrolase-like    Nucleotidylyl transferase    Class I aminoacyl-tRNA synthetases (RS), catalytic domain    Cysteinyl-tRNA synthetase (CysRS)    Escherichia coli GO:  ATP binding    cysteine-tRNA ligase activity    cysteinyl-tRNA aminoacylation    CHAIN: B SWISS-PROT/TREMBL: P21888    KEYWORD: 3D-structure    Aminoacyl-tRNA synthetase    ATP-binding    Complete proteome    Ligase    Metal-binding    Protein biosynthesis    Zinc    EC: 6.1.1.16 SCOP: a.27.1.1 All alpha proteins    Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases    Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases    Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases    Cysteinyl-tRNA synthetase (CysRS)    Escherichia coli SCOP: c.26.1.1 Alpha and beta proteins (a/b)    Adenine nucleotide alpha hydrolase-like    Nucleotidylyl transferase    Class I aminoacyl-tRNA synthetases (RS), catalytic domain    Cysteinyl-tRNA synthetase (CysRS)    Escherichia coli GO:  ATP binding    cysteine-tRNA ligase activity    cysteinyl-tRNA aminoacylation

Image Source: PDB

Loops in ArchDB40 clusters

1li5_A_38 - HE => SUBCLASS : 1.1.1
1li5_A_118 - HE => SUBCLASS : 2.4.1
1li5_A_286 - HE => SUBCLASS : 5.11.1
1li5_A_134 - HA => SUBCLASS : 3.1.1
1li5_A_3 - HA => SUBCLASS : 4.1.1
1li5_A_302 - EH => SUBCLASS : 0.1.3
1li5_A_302 - EH => SUBCLASS : 0.1.18
1li5_A_302 - EH => SUBCLASS : 1.1.2
1li5_A_201 - EH => SUBCLASS : 1.1.30
1li5_A_277 - HH => SUBCLASS : 2.1.3
1li5_A_277 - HH => SUBCLASS : 2.3.5
1li5_A_72 - HH => SUBCLASS : 3.1.1

Loops in ArchDB95 clusters

1li5_A_302 - EH => SUBCLASS : 1.1.5
1li5_A_201 - EH => SUBCLASS : 1.1.43
1li5_A_277 - HH => SUBCLASS : 2.3.1
1li5_A_277 - HH => SUBCLASS : 2.3.3
1li5_A_277 - HH => SUBCLASS : 2.3.8
1li5_A_72 - HH => SUBCLASS : 3.1.1
1li5_A_72 - HH => SUBCLASS : 3.2.1
1li5_A_38 - HE => SUBCLASS : 1.1.1
1li5_A_118 - HE => SUBCLASS : 2.4.1
1li5_A_207 - HE => SUBCLASS : 4.26.1
1li5_A_134 - HA => SUBCLASS : 3.1.1
1li5_A_3 - HA => SUBCLASS : 4.1.1

Loops in ArchDB-EC clusters

1li5_A_72 - HH => SUBCLASS : 3.2.1

Loops not clustered in ArchDB

1li5_A_251 - AR
1li5_A_11 - AR
1li5_A_251 - AR
1li5_A_11 - AR
1li5_A_22 - EH
1li5_A_60 - EH
1li5_A_260 - EH
1li5_A_221 - EH
1li5_A_181 - HA
1li5_A_142 - HA
1li5_A_134 - HA
1li5_A_3 - HA
1li5_A_181 - HA
1li5_A_142 - HA
1li5_A_234 - HE
1li5_A_374 - HH
1li5_A_352 - HH
1li5_A_336 - HH
1li5_A_306 - HH
1li5_A_85 - HH

1li5 A - percentage of sequence identity: 100
1li5 B - percentage of sequence identity: 100
1li7 A - percentage of sequence identity: 100
1li7 B - percentage of sequence identity: 100
1u0b B - percentage of sequence identity: 100