PDB: 1lme Compound: peptide deformylase Classification: HYDROLASE Entry date in PDB: 2003-06-24 Resolution [Å]: 2.20 R-Factor: 0.198

CHAIN: A SWISS-PROT/TREMBL: P96113    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Iron    Protein biosynthesis    EC: 3.5.1.88 SCOP: d.167.1.1 Alpha and beta proteins (a+b)    Peptide deformylase    Peptide deformylase    Peptide deformylase    Peptide deformylase    Thermotoga maritima GO:  iron ion binding    peptide deformylase activity    protein biosynthesis    CHAIN: B SWISS-PROT/TREMBL: P96113    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Iron    Protein biosynthesis    EC: 3.5.1.88 SCOP: d.167.1.1 Alpha and beta proteins (a+b)    Peptide deformylase    Peptide deformylase    Peptide deformylase    Peptide deformylase    Thermotoga maritima GO:  iron ion binding    peptide deformylase activity    protein biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1lme_A_24 - HE => SUBCLASS : 3.1.1
1lme_A_102 - HA => SUBCLASS : 3.1.1
1lme_A_44 - HA => SUBCLASS : 9.4.1

Loops in ArchDB95 clusters

1lme_A_24 - HE => SUBCLASS : 3.1.4
1lme_A_24 - HE => SUBCLASS : 3.3.1
1lme_A_102 - HA => SUBCLASS : 3.1.1
1lme_A_44 - HA => SUBCLASS : 9.7.1

Loops in ArchDB-EC clusters

1lme_A_24 - HE => SUBCLASS : 3.2.5

Loops not clustered in ArchDB

1lme_A_95 - AR
1lme_A_66 - AR
1lme_A_95 - AR
1lme_A_66 - AR
1lme_A_114 - EH
1lme_A_80 - HA
1lme_A_56 - HA
1lme_A_44 - HA
1lme_A_80 - HA
1lme_A_56 - HA
1lme_A_102 - HA

1lme A - percentage of sequence identity: 100
1lme B - percentage of sequence identity: 100