ArchDB - Biological DataBase of Protein Loops

Information on 1m8t

PDB: 1m8t
Compound: phospholipase a2
Classification: HYDROLASE
Entry date in PDB: 2003-09-02
Resolution [Å]: 2.10
R-Factor: 0.192

CHAIN: A

SWISS-PROT/TREMBL: Q9DF33
   KEYWORD: 3D-structure    Calcium    Hydrolase    Lipid degradation    Multigene family    Signal
EC: 3.1.1.4
SCOP: a.133.1.2 All alpha proteins    Phospholipase A2, PLA2    Phospholipase A2, PLA2    Vertebrate phospholipase A2    Snake phospholipase A2    King cobra (Ophiophagus hannah), an acidic isoform
GO:  calcium ion binding    phospholipase A2 activity    lipid catabolism

CHAIN: B

CHAIN: C

CHAIN: D

CHAIN: E

CHAIN: F

Image Source: PDB

Stored Loops of 1m8t

Loops in ArchDB95 clusters

1m8t_A_82 - EH => SUBCLASS : 5.1.3
1m8t_A_90 - HH => SUBCLASS : 11.2.1
1m8t_A_40 - HE => SUBCLASS : 10.1.1
1m8t_A_75 - HA => SUBCLASS : 5.3.1

Loops in ArchDB-EC clusters

1m8t_A_90 - HH => SUBCLASS : 11.2.1

Loops not clustered in ArchDB

1m8t_A_29 - EH
1m8t_A_24 - HA
1m8t_A_24 - HA
1m8t_A_75 - HA
1m8t_A_18 - HE
1m8t_A_2 - HH

Homologous structures to 1m8t classified in ArchDB

1a3d - - percentage of sequence identity: 69
1a3f A - percentage of sequence identity: 69
1a3f B - percentage of sequence identity: 69
1a3f C - percentage of sequence identity: 69
1bp2 - - percentage of sequence identity: 60
1bpq - - percentage of sequence identity: 60
1bvm A - percentage of sequence identity: 60
1c74 A - percentage of sequence identity: 60
1fdk - - percentage of sequence identity: 60
1g4i A - percentage of sequence identity: 60
1gh4 A - percentage of sequence identity: 60
1gp7 A - percentage of sequence identity: 73
1gp7 B - percentage of sequence identity: 73
1gp7 C - percentage of sequence identity: 73
1irb - - percentage of sequence identity: 60
1ln8 A - percentage of sequence identity: 67
1m8t A - percentage of sequence identity: 100
1m8t B - percentage of sequence identity: 100
1m8t C - percentage of sequence identity: 100
1m8t D - percentage of sequence identity: 100
1m8t E - percentage of sequence identity: 100
1m8t F - percentage of sequence identity: 100
1mf4 A - percentage of sequence identity: 67
1mh2 A - percentage of sequence identity: 60
1mh2 B - percentage of sequence identity: 64
1mh7 A - percentage of sequence identity: 66
1mh8 A - percentage of sequence identity: 65
1mkt - - percentage of sequence identity: 60
1mkv - - percentage of sequence identity: 60
1o2e A - percentage of sequence identity: 60
1o3w A - percentage of sequence identity: 60
1ows A - percentage of sequence identity: 65
1ows B - percentage of sequence identity: 62
1oxr A - percentage of sequence identity: 68
1p7o A - percentage of sequence identity: 61
1p7o B - percentage of sequence identity: 61
1p7o C - percentage of sequence identity: 61
1p7o D - percentage of sequence identity: 61
1p7o E - percentage of sequence identity: 61
1p7o F - percentage of sequence identity: 61
1poa - - percentage of sequence identity: 67
1pob A - percentage of sequence identity: 67
1pob B - percentage of sequence identity: 67
1psh A - percentage of sequence identity: 69
1psh B - percentage of sequence identity: 69
1psh C - percentage of sequence identity: 69
1s6b A - percentage of sequence identity: 64
1s6b B - percentage of sequence identity: 66
1sz8 A - percentage of sequence identity: 68
1t37 A - percentage of sequence identity: 67
1td7 A - percentage of sequence identity: 68
1une - - percentage of sequence identity: 60
1vkq A - percentage of sequence identity: 60
1vl9 A - percentage of sequence identity: 60
1xxw A - percentage of sequence identity: 64
1xxw B - percentage of sequence identity: 66
1y75 A - percentage of sequence identity: 65
1y75 B - percentage of sequence identity: 65
1yxh A - percentage of sequence identity: 68
1yxl A - percentage of sequence identity: 68
1zm6 A - percentage of sequence identity: 67
2bax A - percentage of sequence identity: 60
2bp2 - - percentage of sequence identity: 60
2bpp - - percentage of sequence identity: 60
3bp2 - - percentage of sequence identity: 60
3p2p A - percentage of sequence identity: 61
3p2p B - percentage of sequence identity: 61
4bp2 - - percentage of sequence identity: 60
5p2p A - percentage of sequence identity: 61
5p2p B - percentage of sequence identity: 61