PDB: 1mbm Compound: chymotrypsin-like serine protease Classification: TRANSFERASE Entry date in PDB: 2002-10-23 Resolution [Å]: 2.00 R-Factor: 0.207

CHAIN: A SWISS-PROT/TREMBL: P19811    KEYWORD: 3D-structure    ATP-binding    Helicase    Hydrolase    RNA-directed RNA polymerase    Serine protease    Transferase    Zinc-finger    EC: 2.7.7.48 SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    NSP4 proteinase    Equine arteritis virus, EAV GO:  RNA binding    RNA helicase activity    RNA-directed RNA polymerase activity    serine-type endopeptidase activity    transcription    viral genome replication    viral life cycle    viral protein processing    CHAIN: B SWISS-PROT/TREMBL: P19811    KEYWORD: 3D-structure    ATP-binding    Helicase    Hydrolase    RNA-directed RNA polymerase    Serine protease    Transferase    Zinc-finger    EC: 2.7.7.48 SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    NSP4 proteinase    Equine arteritis virus, EAV GO:  RNA binding    RNA helicase activity    RNA-directed RNA polymerase activity    serine-type endopeptidase activity    transcription    viral genome replication    viral life cycle    viral protein processing    CHAIN: C SWISS-PROT/TREMBL: P19811    KEYWORD: 3D-structure    ATP-binding    Helicase    Hydrolase    RNA-directed RNA polymerase    Serine protease    Transferase    Zinc-finger    EC: 2.7.7.48 SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    NSP4 proteinase    Equine arteritis virus, EAV GO:  RNA binding    RNA helicase activity    RNA-directed RNA polymerase activity    serine-type endopeptidase activity    transcription    viral genome replication    viral life cycle    viral protein processing    CHAIN: D SWISS-PROT/TREMBL: P19811    KEYWORD: 3D-structure    ATP-binding    Helicase    Hydrolase    RNA-directed RNA polymerase    Serine protease    Transferase    Zinc-finger    EC: 2.7.7.48 SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    NSP4 proteinase    Equine arteritis virus, EAV GO:  RNA binding    RNA helicase activity    RNA-directed RNA polymerase activity    serine-type endopeptidase activity    transcription    viral genome replication    viral life cycle    viral protein processing

Image Source: PDB

Loops in ArchDB40 clusters

1mbm_A_100 - HA => SUBCLASS : 2.2.4
1mbm_A_46 - HA => SUBCLASS : 2.3.1
1mbm_A_61 - HA => SUBCLASS : 2.3.1
1mbm_A_123 - HA => SUBCLASS : 2.3.7
1mbm_A_142 - HA => SUBCLASS : 3.1.1
1mbm_A_31 - EH => SUBCLASS : 0.1.63
1mbm_A_182 - AR => SUBCLASS : 3.9.1

Loops in ArchDB95 clusters

1mbm_A_182 - AR => SUBCLASS : 3.4.1
1mbm_A_100 - HA => SUBCLASS : 2.2.4
1mbm_A_100 - HA => SUBCLASS : 2.2.5
1mbm_A_61 - HA => SUBCLASS : 2.3.1
1mbm_A_46 - HA => SUBCLASS : 2.3.1
1mbm_A_123 - HA => SUBCLASS : 2.3.24
1mbm_A_142 - HA => SUBCLASS : 3.1.1

Loops in ArchDB-EC clusters

1mbm_A_142 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1mbm_A_182 - AR
1mbm_A_171 - AR
1mbm_A_111 - AR
1mbm_A_66 - AR
1mbm_A_54 - AR
1mbm_A_54 - AR
1mbm_A_66 - AR
1mbm_A_111 - AR
1mbm_A_152 - AR
1mbm_A_171 - AR
1mbm_A_152 - AR
1mbm_A_158 - EH
1mbm_A_188 - EH
1mbm_A_129 - HA
1mbm_A_142 - HA
1mbm_A_129 - HA
1mbm_A_123 - HA
1mbm_A_100 - HA
1mbm_A_91 - HA
1mbm_A_12 - HA
1mbm_A_61 - HA
1mbm_A_20 - HA
1mbm_A_46 - HA
1mbm_A_91 - HA
1mbm_A_12 - HA
1mbm_A_20 - HA
1mbm_A_160 - HE
1mbm_A_38 - HE

1mbm A - percentage of sequence identity: 100
1mbm B - percentage of sequence identity: 100
1mbm C - percentage of sequence identity: 100
1mbm D - percentage of sequence identity: 100