PDB: 1na8 Compound: adp-ribosylation factor binding protein gga1 Classification: SIGNALING PROTEIN, MEMBRANE PROTEIN Entry date in PDB: 2003-07-29 Resolution [Å]: 2.30 R-Factor: 0.219

CHAIN: A SWISS-PROT/TREMBL: Q9UJY5    KEYWORD: 3D-structure    Alternative splicing    Coiled coil    Golgi stack    Protein transport    3D-structure    Alternative splicing    Coiled coil    Golgi stack    Protein transport    SCOP: b.1.10.2 All beta proteins    Immunoglobulin-like beta-sandwich    Clathrin adaptor appendage domain    gamma-adaptin C-terminal appendage domain-like    ADP-ribosylation factor binding protein Gga1 domain    Human (Homo sapiens) GO:  clathrin coat of trans-Golgi network vesicle    Golgi stack    protein transporter activity    intra-Golgi transport    intracellular protein transport    protein complex assembly    CHAIN: B SWISS-PROT/TREMBL: Q9UJY5    KEYWORD: 3D-structure    Alternative splicing    Coiled coil    Golgi stack    Protein transport    SCOP: b.1.10.2 All beta proteins    Immunoglobulin-like beta-sandwich    Clathrin adaptor appendage domain    gamma-adaptin C-terminal appendage domain-like    ADP-ribosylation factor binding protein Gga1 domain    Human (Homo sapiens) GO:  clathrin coat of trans-Golgi network vesicle    Golgi stack    protein transporter activity    intra-Golgi transport    intracellular protein transport    protein complex assembly

Image Source: PDB

Loops in ArchDB95 clusters

1na8_A_555 - AR => SUBCLASS : 3.10.2
1na8_A_555 - AR => SUBCLASS : 4.6.5
1na8_A_540 - AR => SUBCLASS : 5.1.1
1na8_A_540 - AR => SUBCLASS : 5.17.1
1na8_A_592 - AR => SUBCLASS : 6.32.1
1na8_A_515 - HA => SUBCLASS : 2.5.12

Loops not clustered in ArchDB

1na8_A_523 - HA
1na8_A_569 - HA
1na8_A_608 - HA
1na8_A_490 - HE

1na8 A - percentage of sequence identity: 100
1na8 B - percentage of sequence identity: 100
1om9 A - percentage of sequence identity: 99
1om9 B - percentage of sequence identity: 99
1p4u A - percentage of sequence identity: 71