PDB: 1nlf Compound: regulatory protein repa Classification: REPLICATION Entry date in PDB: 2003-04-29 Resolution [Å]: 1.95 R-Factor: 0.201

CHAIN: A SWISS-PROT/TREMBL: P20356    KEYWORD: 3D-structure    ATP-binding    Plasmid    Plasmid copy control    SCOP: c.37.1.11 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    RecA protein-like (ATPase-domain)    Hexameric replicative helicase repA    Escherichia coli GO:  nucleoside-triphosphatase activity    nucleotide binding    CHAIN: B SWISS-PROT/TREMBL: P20356    KEYWORD: 3D-structure    ATP-binding    Plasmid    Plasmid copy control    SCOP: c.37.1.11 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    RecA protein-like (ATPase-domain)    Hexameric replicative helicase repA    Escherichia coli GO:  nucleoside-triphosphatase activity    nucleotide binding    CHAIN: C SWISS-PROT/TREMBL: P20356    KEYWORD: 3D-structure    ATP-binding    Plasmid    Plasmid copy control    SCOP: c.37.1.11 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    RecA protein-like (ATPase-domain)    Hexameric replicative helicase repA    Escherichia coli GO:  nucleoside-triphosphatase activity    nucleotide binding

Image Source: PDB

Loops in ArchDB40 clusters

1nlf_A_96 - HE => SUBCLASS : 0.1.3
1nlf_A_153 - HE => SUBCLASS : 1.1.1
1nlf_A_121 - HE => SUBCLASS : 4.11.1
1nlf_A_9 - HE => SUBCLASS : 6.15.1
1nlf_A_22 - HA => SUBCLASS : 2.5.1
1nlf_A_250 - HA => SUBCLASS : 4.5.1
1nlf_A_209 - EH => SUBCLASS : 1.1.4
1nlf_A_71 - EH => SUBCLASS : 5.1.1
1nlf_A_32 - EH => SUBCLASS : 5.7.2
1nlf_A_27 - AR => SUBCLASS : 3.3.1
1nlf_A_27 - AR => SUBCLASS : 4.1.2
1nlf_A_80 - HH => SUBCLASS : 2.1.2

Loops in ArchDB95 clusters

1nlf_A_209 - EH => SUBCLASS : 2.2.1
1nlf_A_32 - EH => SUBCLASS : 5.5.2
1nlf_A_27 - AR => SUBCLASS : 3.3.2
1nlf_A_80 - HH => SUBCLASS : 2.1.3
1nlf_A_80 - HH => SUBCLASS : 2.1.5
1nlf_A_96 - HE => SUBCLASS : 0.1.2
1nlf_A_153 - HE => SUBCLASS : 1.1.1
1nlf_A_153 - HE => SUBCLASS : 1.2.2
1nlf_A_121 - HE => SUBCLASS : 4.12.1
1nlf_A_22 - HA => SUBCLASS : 2.4.2
1nlf_A_250 - HA => SUBCLASS : 3.2.1

Loops not clustered in ArchDB

1nlf_A_173 - AR
1nlf_A_105 - EH
1nlf_A_136 - EH
1nlf_A_233 - HA
1nlf_A_43 - HE
1nlf_A_217 - HE

1g8y A - percentage of sequence identity: 100
1g8y B - percentage of sequence identity: 100
1g8y C - percentage of sequence identity: 100
1g8y D - percentage of sequence identity: 100
1g8y E - percentage of sequence identity: 100
1g8y F - percentage of sequence identity: 100
1g8y G - percentage of sequence identity: 100
1g8y H - percentage of sequence identity: 100
1g8y I - percentage of sequence identity: 100
1g8y J - percentage of sequence identity: 100
1g8y K - percentage of sequence identity: 100
1g8y L - percentage of sequence identity: 100
1nlf A - percentage of sequence identity: 100
1nlf B - percentage of sequence identity: 100
1nlf C - percentage of sequence identity: 100
1olo A - percentage of sequence identity: 100
1olo B - percentage of sequence identity: 100