PDB: 1nr4 Compound: thymus and activation-regulated chemokine Classification: CYTOKINE Entry date in PDB: 2003-08-05 Resolution [Å]: 1.72 R-Factor: 0.201

CHAIN: A SWISS-PROT/TREMBL: Q92583    KEYWORD: Chemotaxis    Cytokine    Inflammatory response    Signal    SCOP: d.9.1.1 Alpha and beta proteins (a+b)    IL8-like    Interleukin 8-like chemokines    Interleukin 8-like chemokines    Thymus and activation-regulated chemokine, TRAC    Human (Homo sapiens) GO:  extracellular region    chemokine activity    immune response    CHAIN: B SWISS-PROT/TREMBL: Q92583    KEYWORD: Chemotaxis    Cytokine    Inflammatory response    Signal    SCOP: d.9.1.1 Alpha and beta proteins (a+b)    IL8-like    Interleukin 8-like chemokines    Interleukin 8-like chemokines    Thymus and activation-regulated chemokine, TRAC    Human (Homo sapiens) GO:  extracellular region    chemokine activity    immune response    CHAIN: C SWISS-PROT/TREMBL: Q92583    KEYWORD: Chemotaxis    Cytokine    Inflammatory response    Signal    SCOP: d.9.1.1 Alpha and beta proteins (a+b)    IL8-like    Interleukin 8-like chemokines    Interleukin 8-like chemokines    Thymus and activation-regulated chemokine, TRAC    Human (Homo sapiens) GO:  extracellular region    chemokine activity    immune response    CHAIN: D SWISS-PROT/TREMBL: Q92583    KEYWORD: Chemotaxis    Cytokine    Inflammatory response    Signal    SCOP: d.9.1.1 Alpha and beta proteins (a+b)    IL8-like    Interleukin 8-like chemokines    Interleukin 8-like chemokines    Thymus and activation-regulated chemokine, TRAC    Human (Homo sapiens) GO:  extracellular region    chemokine activity    immune response    CHAIN: E SWISS-PROT/TREMBL: Q92583    KEYWORD: Chemotaxis    Cytokine    Inflammatory response    Signal    SCOP: d.9.1.1 Alpha and beta proteins (a+b)    IL8-like    Interleukin 8-like chemokines    Interleukin 8-like chemokines    Thymus and activation-regulated chemokine, TRAC    Human (Homo sapiens) GO:  extracellular region    chemokine activity    immune response    CHAIN: F SWISS-PROT/TREMBL: Q92583    KEYWORD: Chemotaxis    Cytokine    Inflammatory response    Signal    SCOP: d.9.1.1 Alpha and beta proteins (a+b)    IL8-like    Interleukin 8-like chemokines    Interleukin 8-like chemokines    Thymus and activation-regulated chemokine, TRAC    Human (Homo sapiens) GO:  extracellular region    chemokine activity    immune response    CHAIN: G SWISS-PROT/TREMBL: Q92583    KEYWORD: Chemotaxis    Cytokine    Inflammatory response    Signal    SCOP: d.9.1.1 Alpha and beta proteins (a+b)    IL8-like    Interleukin 8-like chemokines    Interleukin 8-like chemokines    Thymus and activation-regulated chemokine, TRAC    Human (Homo sapiens) GO:  extracellular region    chemokine activity    immune response    CHAIN: H SWISS-PROT/TREMBL: Q92583    KEYWORD: Chemotaxis    Cytokine    Inflammatory response    Signal    SCOP: d.9.1.1 Alpha and beta proteins (a+b)    IL8-like    Interleukin 8-like chemokines    Interleukin 8-like chemokines    Thymus and activation-regulated chemokine, TRAC    Human (Homo sapiens) GO:  extracellular region    chemokine activity    immune response

Image Source: PDB

Loops in ArchDB40 clusters

1nr4_A_39 - HA => SUBCLASS : 4.2.1
1nr4_A_24 - HA => SUBCLASS : 7.2.1
1nr4_A_48 - EH => SUBCLASS : 3.1.2

Loops in ArchDB95 clusters

1nr4_A_48 - EH => SUBCLASS : 3.2.1
1nr4_B_48 - EH => SUBCLASS : 3.2.1
1nr4_A_39 - HA => SUBCLASS : 3.1.2
1nr4_A_24 - HA => SUBCLASS : 6.6.1

Loops not clustered in ArchDB

1nr4_B_24 - HA
1nr4_B_39 - HA

1nr2 A - percentage of sequence identity: 100
1nr2 B - percentage of sequence identity: 100
1nr4 A - percentage of sequence identity: 100
1nr4 B - percentage of sequence identity: 100
1nr4 C - percentage of sequence identity: 100
1nr4 D - percentage of sequence identity: 100
1nr4 E - percentage of sequence identity: 100
1nr4 F - percentage of sequence identity: 100
1nr4 G - percentage of sequence identity: 100
1nr4 H - percentage of sequence identity: 100