ArchDB - Biological DataBase of Protein Loops

Information on 1nue

PDB: 1nue
Compound: nucleoside diphosphate kinase
Classification: PHOSPHOTRANSFERASE
Entry date in PDB: 1996-04-03
Resolution [Å]: 2.00
R-Factor: 0.177

CHAIN: A

SWISS-PROT/TREMBL: P22392
   KEYWORD: 3D-structure    Activator    Anti-oncogene    ATP-binding    DNA-binding    Kinase    Nuclear protein    Transcription regulation    Transferase
EC: 2.7.4.6
SCOP: d.58.6.1 Alpha and beta proteins (a+b)    Ferredoxin-like    Nucleoside diphosphate kinases    Nucleoside diphosphate kinases    Nucleoside diphosphate kinases    Human (Homo sapiens)
GO:  ATP binding    nucleoside-diphosphate kinase activity    CTP biosynthesis    GTP biosynthesis    UTP biosynthesis

CHAIN: B

CHAIN: C

CHAIN: D

CHAIN: E

CHAIN: F

Image Source: PDB

Stored Loops of 1nue

Loops in ArchDB95 clusters

1nue_A_34 - EH => SUBCLASS : 3.1.7
1nue_A_73 - EH => SUBCLASS : 3.11.2
1nue_A_45 - HH => SUBCLASS : 1.1.22
1nue_A_13 - HH => SUBCLASS : 1.3.2
1nue_A_123 - HH => SUBCLASS : 11.7.1
1nue_A_83 - HH => SUBCLASS : 12.1.1
1nue_A_61 - HE => SUBCLASS : 0.1.9
1nue_A_61 - HE => SUBCLASS : 1.3.2

Loops in ArchDB-EC clusters

1nue_A_83 - HH => SUBCLASS : 12.1.1

Loops in ArchDB-KI clusters

1nue_A_6 - EH => SUBCLASS : 1.1.3
1nue_A_34 - EH => SUBCLASS : 1.1.4
1nue_A_21 - HE => SUBCLASS : 2.3.2
1nue_A_61 - HE => SUBCLASS : 2.5.1
1nue_A_13 - HH => SUBCLASS : 1.1.1
1nue_A_45 - HH => SUBCLASS : 1.2.1
1nue_A_83 - HH => SUBCLASS : 12.1.1

Loops not clustered in ArchDB

1nue_A_6 - EH
1nue_A_117 - EH
1nue_A_21 - HE
1nue_A_104 - HE

Loops not clustered in ArchDB-KI

1nue_A_73 - EH
1nue_A_117 - EH
1nue_A_104 - HE
1nue_A_123 - HH

Homologous structures to 1nue classified in ArchDB

1b4s A - percentage of sequence identity: 63
1b4s B - percentage of sequence identity: 63
1b4s C - percentage of sequence identity: 63
1b99 A - percentage of sequence identity: 63
1b99 B - percentage of sequence identity: 63
1b99 C - percentage of sequence identity: 63
1b99 D - percentage of sequence identity: 63
1b99 E - percentage of sequence identity: 63
1b99 F - percentage of sequence identity: 63
1be4 A - percentage of sequence identity: 90
1be4 B - percentage of sequence identity: 90
1be4 C - percentage of sequence identity: 90
1bhn A - percentage of sequence identity: 90
1bhn B - percentage of sequence identity: 90
1bhn C - percentage of sequence identity: 90
1bhn D - percentage of sequence identity: 90
1bhn E - percentage of sequence identity: 90
1bhn F - percentage of sequence identity: 90
1bux A - percentage of sequence identity: 63
1bux B - percentage of sequence identity: 63
1bux C - percentage of sequence identity: 63
1f3f A - percentage of sequence identity: 63
1f3f B - percentage of sequence identity: 63
1f3f C - percentage of sequence identity: 63
1f6t A - percentage of sequence identity: 63
1f6t B - percentage of sequence identity: 63
1f6t C - percentage of sequence identity: 63
1hhq A - percentage of sequence identity: 63
1hiy A - percentage of sequence identity: 63
1hiy B - percentage of sequence identity: 63
1hiy C - percentage of sequence identity: 63
1hlw A - percentage of sequence identity: 63
1jxv A - percentage of sequence identity: 88
1jxv B - percentage of sequence identity: 88
1jxv C - percentage of sequence identity: 88
1jxv D - percentage of sequence identity: 88
1jxv E - percentage of sequence identity: 88
1jxv F - percentage of sequence identity: 88
1kdn A - percentage of sequence identity: 63
1kdn B - percentage of sequence identity: 63
1kdn C - percentage of sequence identity: 63
1leo - - percentage of sequence identity: 63
1lwx A - percentage of sequence identity: 63
1lwx B - percentage of sequence identity: 63
1lwx C - percentage of sequence identity: 63
1mn7 A - percentage of sequence identity: 61
1mn7 B - percentage of sequence identity: 61
1mn9 A - percentage of sequence identity: 63
1mn9 B - percentage of sequence identity: 63
1mn9 C - percentage of sequence identity: 63
1ncl - - percentage of sequence identity: 63
1ndc - - percentage of sequence identity: 63
1ndk - - percentage of sequence identity: 63
1ndl A - percentage of sequence identity: 77
1ndl B - percentage of sequence identity: 77
1ndl C - percentage of sequence identity: 77
1ndp A - percentage of sequence identity: 63
1ndp B - percentage of sequence identity: 63
1npk - - percentage of sequence identity: 63
1nsk L - percentage of sequence identity: 100
1nsk N - percentage of sequence identity: 100
1nsk O - percentage of sequence identity: 100
1nsk R - percentage of sequence identity: 100
1nsk T - percentage of sequence identity: 100
1nsk U - percentage of sequence identity: 100
1nsp - - percentage of sequence identity: 63
1nsq A - percentage of sequence identity: 77
1nsq B - percentage of sequence identity: 77
1nsq C - percentage of sequence identity: 77
1nue A - percentage of sequence identity: 100
1nue B - percentage of sequence identity: 100
1nue C - percentage of sequence identity: 100
1nue D - percentage of sequence identity: 100
1nue E - percentage of sequence identity: 100
1nue F - percentage of sequence identity: 100
1pae X - percentage of sequence identity: 63
1pku A - percentage of sequence identity: 60
1pku B - percentage of sequence identity: 60
1pku C - percentage of sequence identity: 60
1pku D - percentage of sequence identity: 60
1pku E - percentage of sequence identity: 60
1pku F - percentage of sequence identity: 60
1pku G - percentage of sequence identity: 60
1pku H - percentage of sequence identity: 60
1pku I - percentage of sequence identity: 60
1pku J - percentage of sequence identity: 60
1pku K - percentage of sequence identity: 60
1pku L - percentage of sequence identity: 60
1s5z A - percentage of sequence identity: 63
1s5z B - percentage of sequence identity: 63
1s5z C - percentage of sequence identity: 63
1s5z D - percentage of sequence identity: 63
1s5z E - percentage of sequence identity: 63
1s5z F - percentage of sequence identity: 63
1u8w A - percentage of sequence identity: 61
1u8w B - percentage of sequence identity: 61
1u8w C - percentage of sequence identity: 61
1u8w D - percentage of sequence identity: 61
1u8w E - percentage of sequence identity: 61
1u8w F - percentage of sequence identity: 61
1ucn A - percentage of sequence identity: 86
1ucn B - percentage of sequence identity: 86
1ucn C - percentage of sequence identity: 86
1w7w A - percentage of sequence identity: 61
1w7w B - percentage of sequence identity: 61
1w7w C - percentage of sequence identity: 61
1w7w D - percentage of sequence identity: 61
1w7w E - percentage of sequence identity: 61
1w7w F - percentage of sequence identity: 61
1xiq A - percentage of sequence identity: 61
1xiq B - percentage of sequence identity: 61
1xiq C - percentage of sequence identity: 61
1xiq D - percentage of sequence identity: 61
1xiq E - percentage of sequence identity: 61
1xiq F - percentage of sequence identity: 61
1zs6 A - percentage of sequence identity: 65
1zs6 B - percentage of sequence identity: 65
1zs6 D - percentage of sequence identity: 65
2bef A - percentage of sequence identity: 63
2bef B - percentage of sequence identity: 63
2bef C - percentage of sequence identity: 63