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Information on 1o6s
PDB: 1o6s
Compound: internalin a
Classification: BACTERIAL INFECTION
Entry date in PDB: 2002-12-13
Resolution [Å]: 1.80
R-Factor: 0.171


CHAIN: A
SWISS-PROT/TREMBL: P25146
   KEYWORD: 3D-structure    Cell wall    Complete proteome    Leucine-rich repeat    Peptidoglycan-anchor    Repeat    Signal   
SCOP: b.1.18.15 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    Internalin Ig-like domain    Internalin A    Listeria monocytogenes
SCOP: c.10.2.1 Alpha and beta proteins (a/b)    Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)    L domain-like    Internalin LRR domain    Internalin A    Listeria monocytogenes
GO:  cell surface   


CHAIN: B
SWISS-PROT/TREMBL: P12830
   KEYWORD: 3D-structure    Calcium-binding    Cell adhesion    Disease mutation    Glycoprotein    Phosphorylation    Polymorphism    Repeat    Signal    Transmembrane    3D-structure    Calcium-binding    Cell adhesion    Disease mutation    Glycoprotein    Phosphorylation    Polymorphism    Repeat    Signal    Transmembrane   
SCOP: b.1.6.1 All beta proteins    Immunoglobulin-like beta-sandwich    Cadherin    Cadherin    E-cadherin (epithelial)    Human (Homo sapiens)
GO:  membrane    calcium ion binding    homophilic cell adhesion   
1o6s Image
Image Source: PDB

Stored Loops of 1o6s

Loops in ArchDB40 clusters

1o6s_B_51 - HA => SUBCLASS : 5.12.1

Loops in ArchDB95 clusters

1o6s_B_51 - HA => SUBCLASS : 5.12.1

Loops not clustered in ArchDB

1o6s_B_2 - AR
1o6s_B_7 - AR
1o6s_B_19 - AR
1o6s_B_25 - AR
1o6s_B_34 - AR
1o6s_B_59 - AR
1o6s_B_73 - HA

Homologous structures to 1o6s classified in ArchDB

1edh B - percentage of sequence identity: 89
1ff5 A - percentage of sequence identity: 89
1ff5 B - percentage of sequence identity: 89
1l3w A - percentage of sequence identity: 71
1o6v A - percentage of sequence identity: 100
1q1p A - percentage of sequence identity: 89
1q55 A - percentage of sequence identity: 71
1q55 B - percentage of sequence identity: 71
1q55 C - percentage of sequence identity: 71
1q55 D - percentage of sequence identity: 71
1q5a A - percentage of sequence identity: 71
1q5a B - percentage of sequence identity: 71
1q5b A - percentage of sequence identity: 71
1q5b B - percentage of sequence identity: 71
1q5b C - percentage of sequence identity: 71
1q5c A - percentage of sequence identity: 71
1q5c B - percentage of sequence identity: 71
1q5c C - percentage of sequence identity: 71
1q5c D - percentage of sequence identity: 71
1suh - - percentage of sequence identity: 89