PDB: 1edh Compound: e-cadherin Classification: CELL ADHESION PROTEIN Entry date in PDB: 1997-01-11 Resolution [Å]: 2.00 R-Factor: 0.206

CHAIN: A SWISS-PROT/TREMBL: P09803    KEYWORD: 3D-structure    Calcium-binding    Cell adhesion    Glycoprotein    Phosphorylation    Repeat    Signal    Transmembrane    SCOP: b.1.6.1 All beta proteins    Immunoglobulin-like beta-sandwich    Cadherin    Cadherin    E-cadherin (epithelial)    Mouse (Mus musculus) SCOP: b.1.6.1 All beta proteins    Immunoglobulin-like beta-sandwich    Cadherin    Cadherin    E-cadherin (epithelial)    Mouse (Mus musculus) GO:  membrane    calcium ion binding    homophilic cell adhesion    CHAIN: B SWISS-PROT/TREMBL: P09803    KEYWORD: 3D-structure    Calcium-binding    Cell adhesion    Glycoprotein    Phosphorylation    Repeat    Signal    Transmembrane    SCOP: b.1.6.1 All beta proteins    Immunoglobulin-like beta-sandwich    Cadherin    Cadherin    E-cadherin (epithelial)    Mouse (Mus musculus) SCOP: b.1.6.1 All beta proteins    Immunoglobulin-like beta-sandwich    Cadherin    Cadherin    E-cadherin (epithelial)    Mouse (Mus musculus) GO:  membrane    calcium ion binding    homophilic cell adhesion

Image Source: PDB

Loops in ArchDB40 clusters

1edh_A_163 - HA => SUBCLASS : 4.1.1
1edh_A_163 - HA => SUBCLASS : 5.12.1

Loops in ArchDB95 clusters

1edh_A_107 - AR => SUBCLASS : 3.4.2
1edh_A_163 - HA => SUBCLASS : 4.1.3
1edh_A_163 - HA => SUBCLASS : 5.12.1

Loops not clustered in ArchDB

1edh_A_7 - AR
1edh_A_171 - AR
1edh_A_147 - AR
1edh_A_132 - AR
1edh_A_126 - AR
1edh_A_112 - AR
1edh_A_92 - AR
1edh_A_59 - AR
1edh_A_34 - AR
1edh_A_19 - AR
1edh_A_73 - HA
1edh_A_51 - HA
1edh_A_186 - HA

1edh A - percentage of sequence identity: 100
1edh B - percentage of sequence identity: 100
1nci A - percentage of sequence identity: 60
1o6s B - percentage of sequence identity: 89