PDB: 1o6u Compound: sec14-like protein 2 Classification: TRANSFERASE Entry date in PDB: 2003-10-17 Resolution [Å]: 2.05 R-Factor: 0.204

CHAIN: A SWISS-PROT/TREMBL: O76054    KEYWORD: Activator    Alternative splicing    Lipid-binding    Nuclear protein    Transcription regulation    Transport    SCOP: a.5.3.1 All alpha proteins    RuvA C-terminal domain-like    CRAL/TRIO N-terminal domain    CRAL/TRIO N-terminal domain    Supernatant protein factor (SPF), N-terminal domain    Human (Homo sapiens) SCOP: b.132.1.1 All beta proteins    Supernatant protein factor (SPF), C-terminal domain    Supernatant protein factor (SPF), C-terminal domain    Supernatant protein factor (SPF), C-terminal domain    Supernatant protein factor (SPF), C-terminal domain    Human (Homo sapiens) SCOP: c.13.1.1 Alpha and beta proteins (a/b)    SpoIIaa-like    CRAL/TRIO domain    CRAL/TRIO domain    Supernatant protein factor (SPF), middle domain    Human (Homo sapiens) GO:  intracellular    membrane    protein carrier activity    transporter activity    intracellular protein transport    transport    CHAIN: C SWISS-PROT/TREMBL: O76054    KEYWORD: Activator    Alternative splicing    Lipid-binding    Nuclear protein    Transcription regulation    Transport    SCOP: a.5.3.1 All alpha proteins    RuvA C-terminal domain-like    CRAL/TRIO N-terminal domain    CRAL/TRIO N-terminal domain    Supernatant protein factor (SPF), N-terminal domain    Human (Homo sapiens) SCOP: b.132.1.1 All beta proteins    Supernatant protein factor (SPF), C-terminal domain    Supernatant protein factor (SPF), C-terminal domain    Supernatant protein factor (SPF), C-terminal domain    Supernatant protein factor (SPF), C-terminal domain    Human (Homo sapiens) SCOP: c.13.1.1 Alpha and beta proteins (a/b)    SpoIIaa-like    CRAL/TRIO domain    CRAL/TRIO domain    Supernatant protein factor (SPF), middle domain    Human (Homo sapiens) GO:  intracellular    membrane    protein carrier activity    transporter activity    intracellular protein transport    transport    CHAIN: E SWISS-PROT/TREMBL: O76054    KEYWORD: Activator    Alternative splicing    Lipid-binding    Nuclear protein    Transcription regulation    Transport    SCOP: a.5.3.1 All alpha proteins    RuvA C-terminal domain-like    CRAL/TRIO N-terminal domain    CRAL/TRIO N-terminal domain    Supernatant protein factor (SPF), N-terminal domain    Human (Homo sapiens) SCOP: b.132.1.1 All beta proteins    Supernatant protein factor (SPF), C-terminal domain    Supernatant protein factor (SPF), C-terminal domain    Supernatant protein factor (SPF), C-terminal domain    Supernatant protein factor (SPF), C-terminal domain    Human (Homo sapiens) SCOP: c.13.1.1 Alpha and beta proteins (a/b)    SpoIIaa-like    CRAL/TRIO domain    CRAL/TRIO domain    Supernatant protein factor (SPF), middle domain    Human (Homo sapiens) GO:  intracellular    membrane    protein carrier activity    transporter activity    intracellular protein transport    transport

Image Source: PDB

Loops in ArchDB40 clusters

1o6u_A_375 - EH => SUBCLASS : 3.3.2
1o6u_A_350 - AR => SUBCLASS : 3.2.16
1o6u_A_280 - AR => SUBCLASS : 3.6.1
1o6u_A_350 - AR => SUBCLASS : 3.15.2
1o6u_A_280 - AR => SUBCLASS : 4.6.1
1o6u_A_289 - AR => SUBCLASS : 4.11.1
1o6u_A_198 - HH => SUBCLASS : 2.1.14
1o6u_A_35 - HH => SUBCLASS : 3.8.1

Loops in ArchDB95 clusters

1o6u_A_375 - EH => SUBCLASS : 3.1.1
1o6u_A_280 - AR => SUBCLASS : 1.1.2
1o6u_A_350 - AR => SUBCLASS : 4.3.1
1o6u_A_289 - AR => SUBCLASS : 4.10.1
1o6u_A_198 - HH => SUBCLASS : 2.1.47
1o6u_A_35 - HH => SUBCLASS : 3.7.1

Loops not clustered in ArchDB

1o6u_A_301 - AR
1o6u_A_335 - AR
1o6u_A_359 - AR
1o6u_A_98 - EH
1o6u_A_149 - EH
1o6u_A_186 - EH
1o6u_A_314 - HA
1o6u_A_224 - HE
1o6u_A_165 - HE
1o6u_A_127 - HE
1o6u_A_78 - HE
1o6u_A_10 - HH
1o6u_A_49 - HH
1o6u_A_57 - HH
1o6u_A_108 - HH
1o6u_A_117 - HH
1o6u_A_211 - HH

1o6u A - percentage of sequence identity: 100
1o6u C - percentage of sequence identity: 100
1o6u E - percentage of sequence identity: 100
1olm A - percentage of sequence identity: 100
1olm C - percentage of sequence identity: 100
1olm E - percentage of sequence identity: 99