PDB: 1o8b Compound: ribose 5-phosphate isomerase Classification: ISOMERASE Entry date in PDB: 2003-01-24 Resolution [Å]: 1.25 R-Factor: 0.224

CHAIN: A SWISS-PROT/TREMBL: P27252    KEYWORD: 3D-structure    Complete proteome    Isomerase    EC: 5.3.1.6 SCOP: c.124.1.4 Alpha and beta proteins (a/b)    NagB/RpiA/CoA transferase    NagB/RpiA/CoA transferase    D-ribose-5-phosphate isomerase (RpiA), catalytic domain    D-ribose-5-phosphate isomerase (RpiA), catalytic domain    Escherichia coli SCOP: c.124.1.4 Alpha and beta proteins (a/b)    NagB/RpiA/CoA transferase    NagB/RpiA/CoA transferase    D-ribose-5-phosphate isomerase (RpiA), catalytic domain    D-ribose-5-phosphate isomerase (RpiA), catalytic domain    Escherichia coli SCOP: d.58.40.1 Alpha and beta proteins (a+b)    Ferredoxin-like    D-ribose-5-phosphate isomerase (RpiA), lid domain    D-ribose-5-phosphate isomerase (RpiA), lid domain    D-ribose-5-phosphate isomerase (RpiA), lid domain    Escherichia coli GO:   CHAIN: B SWISS-PROT/TREMBL: P27252    KEYWORD: 3D-structure    Complete proteome    Isomerase    EC: 5.3.1.6 SCOP: c.124.1.4 Alpha and beta proteins (a/b)    NagB/RpiA/CoA transferase    NagB/RpiA/CoA transferase    D-ribose-5-phosphate isomerase (RpiA), catalytic domain    D-ribose-5-phosphate isomerase (RpiA), catalytic domain    Escherichia coli SCOP: c.124.1.4 Alpha and beta proteins (a/b)    NagB/RpiA/CoA transferase    NagB/RpiA/CoA transferase    D-ribose-5-phosphate isomerase (RpiA), catalytic domain    D-ribose-5-phosphate isomerase (RpiA), catalytic domain    Escherichia coli SCOP: d.58.40.1 Alpha and beta proteins (a+b)    Ferredoxin-like    D-ribose-5-phosphate isomerase (RpiA), lid domain    D-ribose-5-phosphate isomerase (RpiA), lid domain    D-ribose-5-phosphate isomerase (RpiA), lid domain    Escherichia coli GO:

Image Source: PDB

Loops in ArchDB40 clusters

1o8b_A_205 - HA => SUBCLASS : 2.2.2

Loops in ArchDB95 clusters

1o8b_A_100 - HE => SUBCLASS : 0.1.41
1o8b_A_140 - HE => SUBCLASS : 1.1.1
1o8b_A_140 - HE => SUBCLASS : 1.2.2
1o8b_A_205 - HA => SUBCLASS : 2.2.2

Loops in ArchDB-EC clusters

1o8b_A_140 - HE => SUBCLASS : 1.2.5

Loops not clustered in ArchDB

1o8b_A_49 - AR
1o8b_A_192 - AR
1o8b_A_109 - AR
1o8b_A_109 - AR
1o8b_A_49 - AR
1o8b_A_192 - AR
1o8b_A_167 - EH
1o8b_A_131 - EH
1o8b_A_76 - EH
1o8b_A_153 - HA
1o8b_A_24 - HA
1o8b_A_153 - HA
1o8b_A_24 - HA
1o8b_A_205 - HA
1o8b_A_184 - HE

1ks2 A - percentage of sequence identity: 100
1ks2 B - percentage of sequence identity: 100
1lkz A - percentage of sequence identity: 100
1lkz B - percentage of sequence identity: 100
1m0s A - percentage of sequence identity: 64
1m0s B - percentage of sequence identity: 64
1o8b A - percentage of sequence identity: 100
1o8b B - percentage of sequence identity: 100