PDB: 1o91 Compound: collagen alpha 1(viii) chain Classification: COLLAGEN Entry date in PDB: 2003-11-20 Resolution [Å]: 1.90 R-Factor: 0.185

CHAIN: A SWISS-PROT/TREMBL: Q00780    KEYWORD: Cell adhesion    Collagen    Connective tissue    Extracellular matrix    Glycoprotein    Hydroxylation    Repeat    Signal    SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    Collagen NC1 trimerisation domain    Mouse (Mus musculus), isoform VIII GO:  cytoplasm    phosphate transport    CHAIN: B SWISS-PROT/TREMBL: Q00780    KEYWORD: Cell adhesion    Collagen    Connective tissue    Extracellular matrix    Glycoprotein    Hydroxylation    Repeat    Signal    SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    Collagen NC1 trimerisation domain    Mouse (Mus musculus), isoform VIII GO:  cytoplasm    phosphate transport    CHAIN: C SWISS-PROT/TREMBL: Q00780    KEYWORD: Cell adhesion    Collagen    Connective tissue    Extracellular matrix    Glycoprotein    Hydroxylation    Repeat    Signal    SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    Collagen NC1 trimerisation domain    Mouse (Mus musculus), isoform VIII GO:  cytoplasm    phosphate transport

Image Source: PDB

Loops in ArchDB40 clusters

1o91_A_658 - HA => SUBCLASS : 2.3.9
1o91_A_645 - HA => SUBCLASS : 4.1.1
1o91_A_645 - HA => SUBCLASS : 4.1.2
1o91_A_697 - AR => SUBCLASS : 4.4.4
1o91_A_651 - AR => SUBCLASS : 4.40.1

Loops in ArchDB95 clusters

1o91_A_697 - AR => SUBCLASS : 3.3.5
1o91_A_636 - AR => SUBCLASS : 3.33.1
1o91_A_697 - AR => SUBCLASS : 4.5.4
1o91_A_723 - AR => SUBCLASS : 4.30.1
1o91_A_658 - HA => SUBCLASS : 2.3.8
1o91_A_645 - HA => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1o91_A_682 - AR
1o91_A_712 - AR
1o91_A_616 - HA

1gr3 A - percentage of sequence identity: 60
1o91 A - percentage of sequence identity: 100
1o91 B - percentage of sequence identity: 100
1o91 C - percentage of sequence identity: 100