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Information on 1obz
PDB: 1obz
Compound: syntenin 1
Classification: ADHESION/COMPLEX
Entry date in PDB: 2003-07-11
Resolution [Å]: 1.69
R-Factor: 0.148


CHAIN: A
SWISS-PROT/TREMBL: O00560
   KEYWORD: 3D-structure    Cytoskeleton    Endoplasmic reticulum    Membrane    Nuclear protein    Phosphorylation    Polymorphism    Repeat    3D-structure    Cytoskeleton    Endoplasmic reticulum    Membrane    Nuclear protein    Phosphorylation    Polymorphism    Repeat   
SCOP: b.36.1.1 All beta proteins    PDZ domain-like    PDZ domain-like    PDZ domain    Syntenin 1    Human (Homo sapiens)
SCOP: b.36.1.1 All beta proteins    PDZ domain-like    PDZ domain-like    PDZ domain    Syntenin 1    Human (Homo sapiens)
GO:  protein binding   


CHAIN: B
SWISS-PROT/TREMBL: O00560
   KEYWORD: 3D-structure    Cytoskeleton    Endoplasmic reticulum    Membrane    Nuclear protein    Phosphorylation    Polymorphism    Repeat    3D-structure    Cytoskeleton    Endoplasmic reticulum    Membrane    Nuclear protein    Phosphorylation    Polymorphism    Repeat   
SCOP: b.36.1.1 All beta proteins    PDZ domain-like    PDZ domain-like    PDZ domain    Syntenin 1    Human (Homo sapiens)
SCOP: b.36.1.1 All beta proteins    PDZ domain-like    PDZ domain-like    PDZ domain    Syntenin 1    Human (Homo sapiens)
GO:  protein binding   


CHAIN: P
SWISS-PROT/TREMBL: Q01344
   KEYWORD: 3D-structure    Alternative splicing    Glycoprotein    Receptor    Signal    Transmembrane   
GO:  
 1obz Image
Image Source: PDB

Stored Loops of 1obz

Loops in ArchDB40 clusters

1obz_A_127 - HA => SUBCLASS : 2.1.1
1obz_A_135 - EH => SUBCLASS : 4.19.1
1obz_A_164 - EH => SUBCLASS : 5.9.1

Loops in ArchDB95 clusters

1obz_A_135 - EH => SUBCLASS : 4.21.1
1obz_A_164 - EH => SUBCLASS : 5.15.1
1obz_A_127 - HA => SUBCLASS : 2.1.1

Loops not clustered in ArchDB

1obz_A_113 - AR
1obz_A_185 - AR
1obz_A_197 - AR
1obz_A_244 - EH
1obz_A_217 - EH
1obz_A_236 - HA
1obz_A_211 - HA
1obz_A_157 - HA
1obz_A_146 - HE
1obz_A_171 - HE
1obz_A_226 - HE
1obz_A_251 - HE

Homologous structures to 1obz classified in ArchDB

1n99 A - percentage of sequence identity: 100
1n99 B - percentage of sequence identity: 100
1nte A - percentage of sequence identity: 100
1obx A - percentage of sequence identity: 100
1oby A - percentage of sequence identity: 100
1oby B - percentage of sequence identity: 100
1obz A - percentage of sequence identity: 100
1obz B - percentage of sequence identity: 100
1r6j A - percentage of sequence identity: 100
1v1t A - percentage of sequence identity: 100
1v1t B - percentage of sequence identity: 100
1ybo A - percentage of sequence identity: 100
1ybo B - percentage of sequence identity: 100