PDB: 1ofh Compound: atp-dependent hsl protease atp-binding subunit hsl Classification: HYDROLASE Entry date in PDB: 2003-07-03 Resolution [Å]: 2.50 R-Factor: 0.224

CHAIN: A SWISS-PROT/TREMBL: P43773    KEYWORD: 3D-structure    ATP-binding    Chaperone    Complete proteome    SCOP: c.37.1.20 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Extended AAA-ATPase domain    HslU    Haemophilus influenzae GO:  cytoplasm    HslUV protease complex    ATP binding    ATPase activity    HslUV protease activity    nucleoside-triphosphatase activity    nucleotide binding    protein binding    CHAIN: B SWISS-PROT/TREMBL: P43773    KEYWORD: 3D-structure    ATP-binding    Chaperone    Complete proteome    SCOP: c.37.1.20 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Extended AAA-ATPase domain    HslU    Haemophilus influenzae GO:  cytoplasm    HslUV protease complex    ATP binding    ATPase activity    HslUV protease activity    nucleoside-triphosphatase activity    nucleotide binding    protein binding    CHAIN: C SWISS-PROT/TREMBL: P43773    KEYWORD: 3D-structure    ATP-binding    Chaperone    Complete proteome    SCOP: c.37.1.20 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Extended AAA-ATPase domain    HslU    Haemophilus influenzae GO:  cytoplasm    HslUV protease complex    ATP binding    ATPase activity    HslUV protease activity    nucleoside-triphosphatase activity    nucleotide binding    protein binding    CHAIN: G SWISS-PROT/TREMBL: P43772    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Protease    Threonine protease    EC: 3.4.25.- SCOP: d.153.1.4 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    Proteasome subunits    HslV (ClpQ) protease    Haemophilus influenzae GO:  proteasome core complex (sensu Eukaryota)    threonine endopeptidase activity    ubiquitin-dependent protein catabolism    CHAIN: H SWISS-PROT/TREMBL: P43772    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Protease    Threonine protease    EC: 3.4.25.- SCOP: d.153.1.4 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    Proteasome subunits    HslV (ClpQ) protease    Haemophilus influenzae GO:  proteasome core complex (sensu Eukaryota)    threonine endopeptidase activity    ubiquitin-dependent protein catabolism    CHAIN: I SWISS-PROT/TREMBL: P43772    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Protease    Threonine protease    EC: 3.4.25.- SCOP: d.153.1.4 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    Proteasome subunits    HslV (ClpQ) protease    Haemophilus influenzae GO:  proteasome core complex (sensu Eukaryota)    threonine endopeptidase activity    ubiquitin-dependent protein catabolism    CHAIN: L SWISS-PROT/TREMBL: P43772    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Protease    Threonine protease    EC: 3.4.25.- SCOP: d.153.1.4 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    Proteasome subunits    HslV (ClpQ) protease    Haemophilus influenzae GO:  proteasome core complex (sensu Eukaryota)    threonine endopeptidase activity    ubiquitin-dependent protein catabolism    CHAIN: M SWISS-PROT/TREMBL: P43772    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Protease    Threonine protease    EC: 3.4.25.- SCOP: d.153.1.4 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    Proteasome subunits    HslV (ClpQ) protease    Haemophilus influenzae GO:  proteasome core complex (sensu Eukaryota)    threonine endopeptidase activity    ubiquitin-dependent protein catabolism    CHAIN: N SWISS-PROT/TREMBL: P43772    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Protease    Threonine protease    EC: 3.4.25.- SCOP: d.153.1.4 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    Proteasome subunits    HslV (ClpQ) protease    Haemophilus influenzae GO:  proteasome core complex (sensu Eukaryota)    threonine endopeptidase activity    ubiquitin-dependent protein catabolism

Image Source: PDB

Loops in ArchDB95 clusters

1ofh_A_98 - HH => SUBCLASS : 3.7.4
1ofh_A_352 - HE => SUBCLASS : 1.2.2
1ofh_A_63 - HE => SUBCLASS : 2.1.1
1ofh_A_321 - HE => SUBCLASS : 2.3.23
1ofh_A_42 - HE => SUBCLASS : 5.11.1

Loops not clustered in ArchDB

1ofh_A_296 - AR
1ofh_A_418 - EH
1ofh_A_53 - EH
1ofh_A_78 - EH
1ofh_A_253 - EH
1ofh_A_304 - EH
1ofh_A_329 - EH
1ofh_A_366 - EH
1ofh_A_290 - HA
1ofh_A_245 - HE
1ofh_A_272 - HE
1ofh_A_405 - HE
1ofh_A_6 - HH
1ofh_A_21 - HH
1ofh_A_338 - HH
1ofh_A_371 - HH
1ofh_A_394 - HH

1do0 A - percentage of sequence identity: 86
1do0 B - percentage of sequence identity: 86
1do0 C - percentage of sequence identity: 86
1do0 D - percentage of sequence identity: 86
1do0 E - percentage of sequence identity: 86
1do0 F - percentage of sequence identity: 86
1do2 A - percentage of sequence identity: 86
1do2 B - percentage of sequence identity: 86
1do2 C - percentage of sequence identity: 86
1do2 D - percentage of sequence identity: 86
1e94 A - percentage of sequence identity: 80
1e94 E - percentage of sequence identity: 86
1e94 F - percentage of sequence identity: 86
1g3i A - percentage of sequence identity: 78
1g3i B - percentage of sequence identity: 78
1g3i C - percentage of sequence identity: 78
1g3i D - percentage of sequence identity: 78
1g3i E - percentage of sequence identity: 78
1g3i F - percentage of sequence identity: 78
1g3i S - percentage of sequence identity: 78
1g3i T - percentage of sequence identity: 78
1g3i U - percentage of sequence identity: 78
1g3i V - percentage of sequence identity: 78
1g3i W - percentage of sequence identity: 78
1g3i X - percentage of sequence identity: 78
1g3k A - percentage of sequence identity: 100
1g41 A - percentage of sequence identity: 78
1g4a E - percentage of sequence identity: 86
1g4a F - percentage of sequence identity: 86
1g4b E - percentage of sequence identity: 86
1g4b F - percentage of sequence identity: 86
1g4b K - percentage of sequence identity: 86
1g4b L - percentage of sequence identity: 86
1hqy E - percentage of sequence identity: 86
1hqy F - percentage of sequence identity: 86
1ht1 E - percentage of sequence identity: 86
1ht1 F - percentage of sequence identity: 86
1ht1 G - percentage of sequence identity: 86
1ht1 I - percentage of sequence identity: 86
1ht2 E - percentage of sequence identity: 86
1ht2 F - percentage of sequence identity: 86
1ht2 G - percentage of sequence identity: 86
1ht2 H - percentage of sequence identity: 86
1im2 A - percentage of sequence identity: 78
1kyi A - percentage of sequence identity: 78
1kyi B - percentage of sequence identity: 78
1kyi C - percentage of sequence identity: 78
1kyi D - percentage of sequence identity: 78
1kyi E - percentage of sequence identity: 78
1kyi F - percentage of sequence identity: 78
1kyi S - percentage of sequence identity: 78
1kyi T - percentage of sequence identity: 78
1kyi U - percentage of sequence identity: 78
1kyi V - percentage of sequence identity: 78
1kyi W - percentage of sequence identity: 78
1kyi X - percentage of sequence identity: 78
1m4y A - percentage of sequence identity: 65
1ofh A - percentage of sequence identity: 100
1ofh B - percentage of sequence identity: 100
1ofh C - percentage of sequence identity: 100
1ofi A - percentage of sequence identity: 100
1ofi B - percentage of sequence identity: 100
1ofi C - percentage of sequence identity: 100
1yyf A - percentage of sequence identity: 86
1yyf B - percentage of sequence identity: 86