PDB: 1ok3 Compound: complement decay-accelerating factor Classification: REGULATOR OF COMPLEMENT PATHWAY Entry date in PDB: 2004-01-07 Resolution [Å]: 2.20 R-Factor: 0.211

CHAIN: A SWISS-PROT/TREMBL: P08174    KEYWORD: 3D-structure    Alternative splicing    Blood group antigen    Complement pathway    Glycoprotein    GPI-anchor    Lipoprotein    Membrane    Plasma    Polymorphism    Repeat    Signal    Sushi    3D-structure    Alternative splicing    Blood group antigen    Complement pathway    Glycoprotein    GPI-anchor    Lipoprotein    Membrane    Plasma    Polymorphism    Repeat    Signal    Sushi    SCOP: g.18.1.1 Small proteins    Complement control module/SCR domain    Complement control module/SCR domain    Complement control module/SCR domain    Complement decay-accelerating factor (Daf, CD55)    Human (Homo sapiens) SCOP: g.18.1.1 Small proteins    Complement control module/SCR domain    Complement control module/SCR domain    Complement control module/SCR domain    Complement decay-accelerating factor (Daf, CD55)    Human (Homo sapiens) SCOP: g.18.1.1 Small proteins    Complement control module/SCR domain    Complement control module/SCR domain    Complement control module/SCR domain    Complement decay-accelerating factor (Daf, CD55)    Human (Homo sapiens) SCOP: g.18.1.1 Small proteins    Complement control module/SCR domain    Complement control module/SCR domain    Complement control module/SCR domain    Complement decay-accelerating factor (Daf, CD55)    Human (Homo sapiens) GO:   CHAIN: B SWISS-PROT/TREMBL: P08174    KEYWORD: 3D-structure    Alternative splicing    Blood group antigen    Complement pathway    Glycoprotein    GPI-anchor    Lipoprotein    Membrane    Plasma    Polymorphism    Repeat    Signal    Sushi    3D-structure    Alternative splicing    Blood group antigen    Complement pathway    Glycoprotein    GPI-anchor    Lipoprotein    Membrane    Plasma    Polymorphism    Repeat    Signal    Sushi    SCOP: g.18.1.1 Small proteins    Complement control module/SCR domain    Complement control module/SCR domain    Complement control module/SCR domain    Complement decay-accelerating factor (Daf, CD55)    Human (Homo sapiens) SCOP: g.18.1.1 Small proteins    Complement control module/SCR domain    Complement control module/SCR domain    Complement control module/SCR domain    Complement decay-accelerating factor (Daf, CD55)    Human (Homo sapiens) SCOP: g.18.1.1 Small proteins    Complement control module/SCR domain    Complement control module/SCR domain    Complement control module/SCR domain    Complement decay-accelerating factor (Daf, CD55)    Human (Homo sapiens) SCOP: g.18.1.1 Small proteins    Complement control module/SCR domain    Complement control module/SCR domain    Complement control module/SCR domain    Complement decay-accelerating factor (Daf, CD55)    Human (Homo sapiens) GO:

Image Source: PDB

Loops in ArchDB40 clusters

1ok3_A_46 - HA => SUBCLASS : 2.1.1
1ok3_A_23 - AR => SUBCLASS : 3.3.1
1ok3_A_28 - AR => SUBCLASS : 3.6.1

Loops in ArchDB95 clusters

1ok3_A_28 - AR => SUBCLASS : 1.1.1
1ok3_A_28 - AR => SUBCLASS : 1.1.2
1ok3_A_23 - AR => SUBCLASS : 1.1.4
1ok3_A_23 - AR => SUBCLASS : 3.3.3
1ok3_A_28 - AR => SUBCLASS : 4.2.5
1ok3_A_46 - HA => SUBCLASS : 2.1.1
1ok3_A_46 - HA => SUBCLASS : 3.2.1

Loops not clustered in ArchDB

1ok3_A_3 - AR
1ok3_A_187 - AR
1ok3_A_178 - AR
1ok3_A_162 - AR
1ok3_A_153 - AR
1ok3_A_126 - AR
1ok3_A_110 - AR
1ok3_A_101 - AR
1ok3_A_92 - AR
1ok3_A_62 - AR
1ok3_A_54 - AR
1ok3_A_13 - AR
1ok3_A_38 - AR
1ok3_A_216 - HA
1ok3_A_202 - HA
1ok3_A_169 - HA
1ok3_A_140 - HA
1ok3_A_75 - HA
1ok3_A_232 - HA

1ojv A - percentage of sequence identity: 100
1ojv B - percentage of sequence identity: 100
1ojw A - percentage of sequence identity: 100
1ojw B - percentage of sequence identity: 100
1ojy A - percentage of sequence identity: 100
1ojy B - percentage of sequence identity: 100
1ojy C - percentage of sequence identity: 100
1ojy D - percentage of sequence identity: 100
1ok1 A - percentage of sequence identity: 100
1ok1 B - percentage of sequence identity: 100
1ok2 A - percentage of sequence identity: 100
1ok2 B - percentage of sequence identity: 100
1ok3 A - percentage of sequence identity: 100
1ok3 B - percentage of sequence identity: 100
1ok9 A - percentage of sequence identity: 100
1ok9 B - percentage of sequence identity: 100