PDB: 1p9l Compound: dihydrodipicolinate reductase Classification: OXIDOREDUCTASE Entry date in PDB: 2003-08-26 Resolution [Å]: 2.30 R-Factor: 0.193

CHAIN: A SWISS-PROT/TREMBL: P72024    KEYWORD: Complete proteome    Diaminopimelate biosynthesis    Lysine biosynthesis    NADP    Oxidoreductase    EC: 1.3.1.26 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Dihydrodipicolinate reductase    Mycobacterium tuberculosis SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Dihydrodipicolinate reductase    Mycobacterium tuberculosis SCOP: d.81.1.3 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Dihydrodipicolinate reductase-like    Dihydrodipicolinate reductase    Mycobacterium tuberculosis GO:  cytoplasm    dihydrodipicolinate reductase activity    lysine biosynthesis via diaminopimelate    CHAIN: B SWISS-PROT/TREMBL: P72024    KEYWORD: Complete proteome    Diaminopimelate biosynthesis    Lysine biosynthesis    NADP    Oxidoreductase    EC: 1.3.1.26 SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Dihydrodipicolinate reductase    Mycobacterium tuberculosis SCOP: c.2.1.3 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain    Dihydrodipicolinate reductase    Mycobacterium tuberculosis SCOP: d.81.1.3 Alpha and beta proteins (a+b)    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain    Dihydrodipicolinate reductase-like    Dihydrodipicolinate reductase    Mycobacterium tuberculosis GO:  cytoplasm    dihydrodipicolinate reductase activity    lysine biosynthesis via diaminopimelate

Image Source: PDB

Loops in ArchDB40 clusters

1p9l_A_58 - HE => SUBCLASS : 1.1.1
1p9l_A_107 - HE => SUBCLASS : 2.5.6
1p9l_A_39 - HE => SUBCLASS : 3.1.1
1p9l_A_81 - HE => SUBCLASS : 4.25.1
1p9l_A_192 - HA => SUBCLASS : 2.5.1
1p9l_A_192 - HA => SUBCLASS : 2.6.1
1p9l_A_2 - EH => SUBCLASS : 4.14.1
1p9l_A_98 - EH => SUBCLASS : 4.31.2
1p9l_A_71 - EH => SUBCLASS : 6.40.1
1p9l_A_180 - AR => SUBCLASS : 4.29.1

Loops in ArchDB95 clusters

1p9l_A_2 - EH => SUBCLASS : 4.7.1
1p9l_A_98 - EH => SUBCLASS : 4.30.3
1p9l_A_71 - EH => SUBCLASS : 6.47.1
1p9l_A_180 - AR => SUBCLASS : 4.26.1
1p9l_A_180 - AR => SUBCLASS : 5.40.1
1p9l_A_58 - HE => SUBCLASS : 1.1.1
1p9l_A_107 - HE => SUBCLASS : 2.2.7
1p9l_A_107 - HE => SUBCLASS : 2.3.15
1p9l_A_107 - HE => SUBCLASS : 2.3.20
1p9l_A_39 - HE => SUBCLASS : 3.1.1
1p9l_A_81 - HE => SUBCLASS : 4.20.1
1p9l_A_192 - HA => SUBCLASS : 2.4.1
1p9l_A_192 - HA => SUBCLASS : 2.4.2

Loops in ArchDB-EC clusters

1p9l_A_81 - HE => SUBCLASS : 4.21.1

Loops not clustered in ArchDB

1p9l_A_180 - AR
1p9l_A_27 - EH
1p9l_A_48 - EH
1p9l_A_125 - EH
1p9l_A_203 - EH
1p9l_A_233 - EH
1p9l_A_175 - HA
1p9l_A_175 - HA
1p9l_A_192 - HA
1p9l_A_218 - HE
1p9l_A_11 - HE
1p9l_A_142 - HE

1c3v A - percentage of sequence identity: 100
1c3v B - percentage of sequence identity: 100
1p9l A - percentage of sequence identity: 100
1p9l B - percentage of sequence identity: 100
1yl5 A - percentage of sequence identity: 99
1yl5 B - percentage of sequence identity: 99
1yl6 A - percentage of sequence identity: 99
1yl6 B - percentage of sequence identity: 99
1yl7 A - percentage of sequence identity: 99
1yl7 B - percentage of sequence identity: 99
1yl7 C - percentage of sequence identity: 99
1yl7 D - percentage of sequence identity: 99
1yl7 E - percentage of sequence identity: 99
1yl7 F - percentage of sequence identity: 99
1yl7 G - percentage of sequence identity: 99
1yl7 H - percentage of sequence identity: 99