PDB: 1qbj Compound: double-stranded RNA specific adenosine deaminase ( Classification: HYDROLASE/DNA Entry date in PDB: 1999-07-02 Resolution [Å]: 2.10 R-Factor: 0.227

CHAIN: A SWISS-PROT/TREMBL: P55265    KEYWORD: 3D-structure    Alternative splicing    Disease mutation    DNA-binding    Hydrolase    Metal-binding    mRNA processing    Nuclear protein    Polymorphism    Repeat    RNA-binding    Zinc    EC: 3.5.4.- SCOP: a.4.5.19 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    Z-DNA binding domain    Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1    Human (Homo sapiens) GO:  intracellular    adenosine deaminase activity    double-stranded RNA adenosine deaminase activity    double-stranded RNA binding    RNA binding    RNA processing    CHAIN: B SWISS-PROT/TREMBL: P55265    KEYWORD: 3D-structure    Alternative splicing    Disease mutation    DNA-binding    Hydrolase    Metal-binding    mRNA processing    Nuclear protein    Polymorphism    Repeat    RNA-binding    Zinc    EC: 3.5.4.- SCOP: a.4.5.19 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    Z-DNA binding domain    Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1    Human (Homo sapiens) GO:  intracellular    adenosine deaminase activity    double-stranded RNA adenosine deaminase activity    double-stranded RNA binding    RNA binding    RNA processing    CHAIN: C SWISS-PROT/TREMBL: P55265    KEYWORD: 3D-structure    Alternative splicing    Disease mutation    DNA-binding    Hydrolase    Metal-binding    mRNA processing    Nuclear protein    Polymorphism    Repeat    RNA-binding    Zinc    EC: 3.5.4.- SCOP: a.4.5.19 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    Z-DNA binding domain    Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1    Human (Homo sapiens) GO:  intracellular    adenosine deaminase activity    double-stranded RNA adenosine deaminase activity    double-stranded RNA binding    RNA binding    RNA processing

Image Source: PDB

Loops in ArchDB40 clusters

1qbj_A_169 - HE => SUBCLASS : 2.4.1
1qbj_A_158 - HH => SUBCLASS : 3.1.1

Loops in ArchDB95 clusters

1qbj_A_158 - HH => SUBCLASS : 3.1.1
1qbj_A_169 - HE => SUBCLASS : 2.4.1

Loops in ArchDB-EC clusters

1qbj_A_158 - HH => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1qbj_A_185 - HA
1qbj_A_185 - HA
1qbj_A_135 - HH

1qbj A - percentage of sequence identity: 100
1qbj B - percentage of sequence identity: 100
1qbj C - percentage of sequence identity: 100
1qgp A - percentage of sequence identity: 100
2acj A - percentage of sequence identity: 100
2acj B - percentage of sequence identity: 100
2acj C - percentage of sequence identity: 100
2acj D - percentage of sequence identity: 100