PDB: 1qiu Compound: adenovirus fibre Classification: FIBRE PROTEIN Entry date in PDB: 1999-10-29 Resolution [Å]: 2.40 R-Factor: 0.232

CHAIN: A SWISS-PROT/TREMBL: P03275    KEYWORD: 3D-structure    Fiber protein    Repeat    SCOP: b.21.1.1 All beta proteins    Virus attachment protein globular domain    Virus attachment protein globular domain    Adenovirus fiber protein "knob" domain    Adenovirus fiber protein "knob" domain    Human adenovirus type 2 SCOP: b.83.1.1 All beta proteins    Triple beta-spiral    Fibre shaft of virus attachment proteins    Adenovirus    Adenovirus    Human adenovirus type 2 GO:  cell recognition    CHAIN: B SWISS-PROT/TREMBL: P03275    KEYWORD: 3D-structure    Fiber protein    Repeat    SCOP: b.21.1.1 All beta proteins    Virus attachment protein globular domain    Virus attachment protein globular domain    Adenovirus fiber protein "knob" domain    Adenovirus fiber protein "knob" domain    Human adenovirus type 2 SCOP: b.83.1.1 All beta proteins    Triple beta-spiral    Fibre shaft of virus attachment proteins    Adenovirus    Adenovirus    Human adenovirus type 2 GO:  cell recognition    CHAIN: C SWISS-PROT/TREMBL: P03275    KEYWORD: 3D-structure    Fiber protein    Repeat    SCOP: b.21.1.1 All beta proteins    Virus attachment protein globular domain    Virus attachment protein globular domain    Adenovirus fiber protein "knob" domain    Adenovirus fiber protein "knob" domain    Human adenovirus type 2 SCOP: b.83.1.1 All beta proteins    Triple beta-spiral    Fibre shaft of virus attachment proteins    Adenovirus    Adenovirus    Human adenovirus type 2 GO:  cell recognition    CHAIN: D SWISS-PROT/TREMBL: P03275    KEYWORD: 3D-structure    Fiber protein    Repeat    SCOP: b.21.1.1 All beta proteins    Virus attachment protein globular domain    Virus attachment protein globular domain    Adenovirus fiber protein "knob" domain    Adenovirus fiber protein "knob" domain    Human adenovirus type 2 SCOP: b.83.1.1 All beta proteins    Triple beta-spiral    Fibre shaft of virus attachment proteins    Adenovirus    Adenovirus    Human adenovirus type 2 GO:  cell recognition    CHAIN: E SWISS-PROT/TREMBL: P03275    KEYWORD: 3D-structure    Fiber protein    Repeat    SCOP: b.21.1.1 All beta proteins    Virus attachment protein globular domain    Virus attachment protein globular domain    Adenovirus fiber protein "knob" domain    Adenovirus fiber protein "knob" domain    Human adenovirus type 2 SCOP: b.83.1.1 All beta proteins    Triple beta-spiral    Fibre shaft of virus attachment proteins    Adenovirus    Adenovirus    Human adenovirus type 2 GO:  cell recognition    CHAIN: F SWISS-PROT/TREMBL: P03275    KEYWORD: 3D-structure    Fiber protein    Repeat    SCOP: b.21.1.1 All beta proteins    Virus attachment protein globular domain    Virus attachment protein globular domain    Adenovirus fiber protein "knob" domain    Adenovirus fiber protein "knob" domain    Human adenovirus type 2 SCOP: b.83.1.1 All beta proteins    Triple beta-spiral    Fibre shaft of virus attachment proteins    Adenovirus    Adenovirus    Human adenovirus type 2 GO:  cell recognition

Image Source: PDB

Loops in ArchDB40 clusters

1qiu_A_327 - HA => SUBCLASS : 2.1.1
1qiu_A_365 - HA => SUBCLASS : 3.1.1
1qiu_A_381 - HA => SUBCLASS : 3.1.1
1qiu_A_357 - AR => SUBCLASS : 3.6.2
1qiu_A_373 - AR => SUBCLASS : 3.6.2
1qiu_A_333 - AR => SUBCLASS : 3.6.2

Loops in ArchDB95 clusters

1qiu_A_357 - AR => SUBCLASS : 3.17.1
1qiu_A_373 - AR => SUBCLASS : 3.17.1
1qiu_A_333 - AR => SUBCLASS : 3.17.1
1qiu_A_327 - HA => SUBCLASS : 2.1.1
1qiu_A_365 - HA => SUBCLASS : 3.1.1
1qiu_A_381 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1qiu_A_485 - AR
1qiu_A_388 - AR
1qiu_A_568 - AR
1qiu_A_454 - AR
1qiu_A_551 - AR
1qiu_A_431 - EH
1qiu_A_529 - HA
1qiu_A_515 - HA
1qiu_A_342 - HA
1qiu_A_479 - HA
1qiu_A_419 - HA
1qiu_A_396 - HA
1qiu_A_446 - HE

1knb - - percentage of sequence identity: 66
1qhv A - percentage of sequence identity: 100
1qiu A - percentage of sequence identity: 100
1qiu B - percentage of sequence identity: 100
1qiu C - percentage of sequence identity: 100
1qiu D - percentage of sequence identity: 100
1qiu E - percentage of sequence identity: 100
1qiu F - percentage of sequence identity: 100
1v1h A - percentage of sequence identity: 100
1v1h B - percentage of sequence identity: 100
1v1h C - percentage of sequence identity: 100
1v1h D - percentage of sequence identity: 100
1v1h E - percentage of sequence identity: 100
1v1h F - percentage of sequence identity: 100
1v1i A - percentage of sequence identity: 100
1v1i B - percentage of sequence identity: 100
1v1i C - percentage of sequence identity: 100