PDB: 1qzq Compound: tyrosyl-DNA phosphodiesterase 1 Classification: HYDROLASE, DNA BINDING PROTEIN Entry date in PDB: 2004-05-11 Resolution [Å]: 2.40 R-Factor: 0.185

CHAIN: A SWISS-PROT/TREMBL: Q9NUW8    KEYWORD: 3D-structure    Disease mutation    DNA repair    Hydrolase    Nuclear protein    Repeat    EC: 3.1.4.- SCOP: d.136.1.3 Alpha and beta proteins (a+b)    Phospholipase D/nuclease    Phospholipase D/nuclease    Tyrosyl-DNA phosphodiesterase TDP1    Tyrosyl-DNA phosphodiesterase TDP1    Human (Homo sapiens) SCOP: d.136.1.3 Alpha and beta proteins (a+b)    Phospholipase D/nuclease    Phospholipase D/nuclease    Tyrosyl-DNA phosphodiesterase TDP1    Tyrosyl-DNA phosphodiesterase TDP1    Human (Homo sapiens) GO:  nucleus    phosphoric diester hydrolase activity    DNA repair    CHAIN: B SWISS-PROT/TREMBL: Q9NUW8    KEYWORD: 3D-structure    Disease mutation    DNA repair    Hydrolase    Nuclear protein    Repeat    EC: 3.1.4.- SCOP: d.136.1.3 Alpha and beta proteins (a+b)    Phospholipase D/nuclease    Phospholipase D/nuclease    Tyrosyl-DNA phosphodiesterase TDP1    Tyrosyl-DNA phosphodiesterase TDP1    Human (Homo sapiens) SCOP: d.136.1.3 Alpha and beta proteins (a+b)    Phospholipase D/nuclease    Phospholipase D/nuclease    Tyrosyl-DNA phosphodiesterase TDP1    Tyrosyl-DNA phosphodiesterase TDP1    Human (Homo sapiens) GO:  nucleus    phosphoric diester hydrolase activity    DNA repair

Image Source: PDB

Loops in ArchDB95 clusters

1qzq_A_531 - AR => SUBCLASS : 3.1.1
1qzq_A_531 - AR => SUBCLASS : 3.1.8
1qzq_A_524 - HA => SUBCLASS : 4.6.1
1qzq_A_495 - HA => SUBCLASS : 5.2.4

Loops not clustered in ArchDB

1qzq_A_248 - AR
1qzq_A_353 - AR
1qzq_A_477 - AR
1qzq_A_538 - AR
1qzq_A_506 - EH
1qzq_A_437 - EH
1qzq_A_394 - EH
1qzq_A_360 - EH
1qzq_A_295 - EH
1qzq_A_224 - EH
1qzq_A_196 - EH
1qzq_A_166 - EH
1qzq_A_275 - HA
1qzq_A_266 - HA
1qzq_A_519 - HE
1qzq_A_464 - HE
1qzq_A_415 - HE
1qzq_A_371 - HE
1qzq_A_333 - HE
1qzq_A_232 - HE
1qzq_A_208 - HE
1qzq_A_185 - HE
1qzq_A_319 - HH
1qzq_A_444 - HH

1jy1 A - percentage of sequence identity: 99
1mu7 A - percentage of sequence identity: 99
1mu7 B - percentage of sequence identity: 99
1mu9 A - percentage of sequence identity: 99
1mu9 B - percentage of sequence identity: 99
1nop A - percentage of sequence identity: 99
1nop B - percentage of sequence identity: 99
1qzq A - percentage of sequence identity: 100
1qzq B - percentage of sequence identity: 100
1rff A - percentage of sequence identity: 99
1rff B - percentage of sequence identity: 99
1rfi A - percentage of sequence identity: 99
1rfi B - percentage of sequence identity: 99
1rg1 A - percentage of sequence identity: 99
1rg1 B - percentage of sequence identity: 99
1rg2 A - percentage of sequence identity: 99
1rg2 B - percentage of sequence identity: 99
1rgt A - percentage of sequence identity: 99
1rgt B - percentage of sequence identity: 99
1rgu A - percentage of sequence identity: 99
1rgu B - percentage of sequence identity: 99
1rh0 A - percentage of sequence identity: 99
1rh0 B - percentage of sequence identity: 99