PDB: 1rlv Compound: putative trna-intron endonuclease Classification: HYDROLASE Entry date in PDB: 2003-12-09 Resolution [Å]: 3.00 R-Factor: 0.229

CHAIN: A SWISS-PROT/TREMBL: O29362    KEYWORD: Complete proteome    Endonuclease    Hydrolase    Nuclease    tRNA processing    EC: 3.1.27.9 SCOP: c.52.2.1 Alpha and beta proteins (a/b)    Restriction endonuclease-like    tRNA-intron endonuclease catalytic domain-like    tRNA-intron endonuclease catalytic domain-like    Dimeric tRNA splicing endonuclease, domains 2 and 4    Archaeon Archaeoglobus fulgidus SCOP: c.52.2.1 Alpha and beta proteins (a/b)    Restriction endonuclease-like    tRNA-intron endonuclease catalytic domain-like    tRNA-intron endonuclease catalytic domain-like    Dimeric tRNA splicing endonuclease, domains 2 and 4    Archaeon Archaeoglobus fulgidus SCOP: d.75.1.1 Alpha and beta proteins (a+b)    MutS N-terminal domain-like    tRNA-intron endonuclease N-terminal domain-like    tRNA-intron endonuclease N-terminal domain-like    Dimeric tRNA splicing endonuclease, domains 1 and 3    Archaeon Archaeoglobus fulgidus SCOP: d.75.1.1 Alpha and beta proteins (a+b)    MutS N-terminal domain-like    tRNA-intron endonuclease N-terminal domain-like    tRNA-intron endonuclease N-terminal domain-like    Dimeric tRNA splicing endonuclease, domains 1 and 3    Archaeon Archaeoglobus fulgidus GO:  tRNA-intron endonuclease complex    tRNA-intron endonuclease activity    tRNA splicing    CHAIN: B SWISS-PROT/TREMBL: O29362    KEYWORD: Complete proteome    Endonuclease    Hydrolase    Nuclease    tRNA processing    EC: 3.1.27.9 SCOP: c.52.2.1 Alpha and beta proteins (a/b)    Restriction endonuclease-like    tRNA-intron endonuclease catalytic domain-like    tRNA-intron endonuclease catalytic domain-like    Dimeric tRNA splicing endonuclease, domains 2 and 4    Archaeon Archaeoglobus fulgidus SCOP: c.52.2.1 Alpha and beta proteins (a/b)    Restriction endonuclease-like    tRNA-intron endonuclease catalytic domain-like    tRNA-intron endonuclease catalytic domain-like    Dimeric tRNA splicing endonuclease, domains 2 and 4    Archaeon Archaeoglobus fulgidus SCOP: d.75.1.1 Alpha and beta proteins (a+b)    MutS N-terminal domain-like    tRNA-intron endonuclease N-terminal domain-like    tRNA-intron endonuclease N-terminal domain-like    Dimeric tRNA splicing endonuclease, domains 1 and 3    Archaeon Archaeoglobus fulgidus SCOP: d.75.1.1 Alpha and beta proteins (a+b)    MutS N-terminal domain-like    tRNA-intron endonuclease N-terminal domain-like    tRNA-intron endonuclease N-terminal domain-like    Dimeric tRNA splicing endonuclease, domains 1 and 3    Archaeon Archaeoglobus fulgidus GO:  tRNA-intron endonuclease complex    tRNA-intron endonuclease activity    tRNA splicing

Image Source: PDB

Loops in ArchDB-EC clusters

1rlv_A_202 - HH => SUBCLASS : 1.2.4

Loops not clustered in ArchDB

1rlv_A_128 - AR
1rlv_A_92 - AR
1rlv_A_260 - AR
1rlv_A_270 - EH
1rlv_A_195 - EH
1rlv_A_178 - EH
1rlv_A_158 - EH
1rlv_A_101 - EH
1rlv_A_27 - EH
1rlv_A_7 - EH
1rlv_A_86 - HA
1rlv_A_118 - HA
1rlv_A_149 - HA
1rlv_A_173 - HA
1rlv_A_232 - HA
1rlv_A_243 - HA
1rlv_A_81 - HA
1rlv_A_22 - HA
1rlv_A_288 - HA
1rlv_A_13 - HE
1rlv_A_63 - HE
1rlv_A_104 - HE
1rlv_A_164 - HE
1rlv_A_183 - HE
1rlv_A_216 - HE
1rlv_A_272 - HE
1rlv_A_49 - HH
1rlv_A_32 - HH

1r0v A - percentage of sequence identity: 100
1r0v B - percentage of sequence identity: 100
1r0v C - percentage of sequence identity: 100
1r0v D - percentage of sequence identity: 100
1r11 A - percentage of sequence identity: 100
1r11 B - percentage of sequence identity: 100
1rlv A - percentage of sequence identity: 100
1rlv B - percentage of sequence identity: 100