PDB: 1rre Compound: atp-dependent protease la Classification: HYDROLASE Entry date in PDB: 2004-02-03 Resolution [Å]: 1.75 R-Factor: 0.210

CHAIN: A SWISS-PROT/TREMBL: P08177    KEYWORD: Allosteric enzyme    ATP-binding    Complete proteome    DNA-binding    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.53 SCOP: d.14.1.10 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    ATP-dependent protease Lon (La), catalytic domain    ATP-dependent protease Lon (La), catalytic domain    Escherichia coli GO:  ATP binding    ATP binding    ATP-dependent peptidase activity    ATP-dependent peptidase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    serine-type endopeptidase activity    serine-type endopeptidase activity    ATP-dependent proteolysis    ATP-dependent proteolysis    proteolysis and peptidolysis    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: P08177    KEYWORD: Allosteric enzyme    ATP-binding    Complete proteome    DNA-binding    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.53 SCOP: d.14.1.10 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    ATP-dependent protease Lon (La), catalytic domain    ATP-dependent protease Lon (La), catalytic domain    Escherichia coli GO:  ATP binding    ATP binding    ATP-dependent peptidase activity    ATP-dependent peptidase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    serine-type endopeptidase activity    serine-type endopeptidase activity    ATP-dependent proteolysis    ATP-dependent proteolysis    proteolysis and peptidolysis    proteolysis and peptidolysis    CHAIN: C SWISS-PROT/TREMBL: P08177    KEYWORD: Allosteric enzyme    ATP-binding    Complete proteome    DNA-binding    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.53 SCOP: d.14.1.10 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    ATP-dependent protease Lon (La), catalytic domain    ATP-dependent protease Lon (La), catalytic domain    Escherichia coli GO:  ATP binding    ATP binding    ATP-dependent peptidase activity    ATP-dependent peptidase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    serine-type endopeptidase activity    serine-type endopeptidase activity    ATP-dependent proteolysis    ATP-dependent proteolysis    proteolysis and peptidolysis    proteolysis and peptidolysis    CHAIN: D SWISS-PROT/TREMBL: P08177    KEYWORD: Allosteric enzyme    ATP-binding    Complete proteome    DNA-binding    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.53 SCOP: d.14.1.10 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    ATP-dependent protease Lon (La), catalytic domain    ATP-dependent protease Lon (La), catalytic domain    Escherichia coli GO:  ATP binding    ATP binding    ATP-dependent peptidase activity    ATP-dependent peptidase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    serine-type endopeptidase activity    serine-type endopeptidase activity    ATP-dependent proteolysis    ATP-dependent proteolysis    proteolysis and peptidolysis    proteolysis and peptidolysis    CHAIN: E SWISS-PROT/TREMBL: P08177    KEYWORD: Allosteric enzyme    ATP-binding    Complete proteome    DNA-binding    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.53 SCOP: d.14.1.10 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    ATP-dependent protease Lon (La), catalytic domain    ATP-dependent protease Lon (La), catalytic domain    Escherichia coli GO:  ATP binding    ATP binding    ATP-dependent peptidase activity    ATP-dependent peptidase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    serine-type endopeptidase activity    serine-type endopeptidase activity    ATP-dependent proteolysis    ATP-dependent proteolysis    proteolysis and peptidolysis    proteolysis and peptidolysis    CHAIN: F SWISS-PROT/TREMBL: P08177    KEYWORD: Allosteric enzyme    ATP-binding    Complete proteome    DNA-binding    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.53 SCOP: d.14.1.10 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    ATP-dependent protease Lon (La), catalytic domain    ATP-dependent protease Lon (La), catalytic domain    Escherichia coli GO:  ATP binding    ATP binding    ATP-dependent peptidase activity    ATP-dependent peptidase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    serine-type endopeptidase activity    serine-type endopeptidase activity    ATP-dependent proteolysis    ATP-dependent proteolysis    proteolysis and peptidolysis    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1rre_A_749 - HE => SUBCLASS : 0.1.1
1rre_A_719 - HE => SUBCLASS : 3.1.1
1rre_A_596 - HA => SUBCLASS : 2.2.42
1rre_A_706 - HA => SUBCLASS : 3.1.1
1rre_A_756 - EH => SUBCLASS : 2.1.1

Loops in ArchDB95 clusters

1rre_A_756 - EH => SUBCLASS : 2.1.2
1rre_A_749 - HE => SUBCLASS : 0.1.1
1rre_A_719 - HE => SUBCLASS : 3.1.1
1rre_A_706 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1rre_A_607 - AR
1rre_A_662 - AR
1rre_A_624 - EH
1rre_A_675 - EH
1rre_A_713 - EH
1rre_A_733 - EH
1rre_A_649 - HE
1rre_A_686 - HE
1rre_A_636 - HH

1rr9 A - percentage of sequence identity: 100
1rr9 B - percentage of sequence identity: 100
1rr9 C - percentage of sequence identity: 100
1rr9 D - percentage of sequence identity: 100
1rr9 E - percentage of sequence identity: 100
1rr9 F - percentage of sequence identity: 100
1rre A - percentage of sequence identity: 100
1rre B - percentage of sequence identity: 100
1rre C - percentage of sequence identity: 100
1rre D - percentage of sequence identity: 100
1rre E - percentage of sequence identity: 100
1rre F - percentage of sequence identity: 100