PDB: 1toa Compound: periplasmic binding protein troa Classification: BINDING PROTEIN Entry date in PDB: 1999-07-05 Resolution [Å]: 1.80 R-Factor: 0.176

CHAIN: A SWISS-PROT/TREMBL: P96116    KEYWORD: 3D-structure    Complete proteome    Metal-binding    Periplasmic    Signal    Transport    Zinc    Zinc transport    SCOP: c.92.2.2 Alpha and beta proteins (a/b)    Chelatase-like    "Helical backbone" metal receptor    TroA-like    Periplasmic zinc binding protein TroA    Treponema pallidum GO:  periplasmic space (sensu Gram-negative Bacteria)    binding    cell adhesion    CHAIN: B SWISS-PROT/TREMBL: P96116    KEYWORD: 3D-structure    Complete proteome    Metal-binding    Periplasmic    Signal    Transport    Zinc    Zinc transport    SCOP: c.92.2.2 Alpha and beta proteins (a/b)    Chelatase-like    "Helical backbone" metal receptor    TroA-like    Periplasmic zinc binding protein TroA    Treponema pallidum GO:  periplasmic space (sensu Gram-negative Bacteria)    binding    cell adhesion

Image Source: PDB

Loops in ArchDB40 clusters

1toa_A_203 - HE => SUBCLASS : 1.1.5
1toa_A_227 - HE => SUBCLASS : 2.1.6
1toa_A_74 - HE => SUBCLASS : 2.3.1
1toa_A_227 - HE => SUBCLASS : 3.2.8
1toa_A_254 - HE => SUBCLASS : 3.5.8
1toa_A_35 - EH => SUBCLASS : 2.1.1

Loops in ArchDB95 clusters

1toa_A_35 - EH => SUBCLASS : 2.1.2
1toa_A_244 - EH => SUBCLASS : 4.2.7
1toa_A_138 - HH => SUBCLASS : 1.2.28
1toa_A_203 - HE => SUBCLASS : 1.2.4
1toa_A_74 - HE => SUBCLASS : 2.2.1
1toa_A_254 - HE => SUBCLASS : 3.2.2
1toa_A_227 - HE => SUBCLASS : 3.26.1
1toa_A_98 - HE => SUBCLASS : 3.32.1

Loops not clustered in ArchDB

1toa_A_56 - EH
1toa_A_85 - EH
1toa_A_109 - EH
1toa_A_194 - EH
1toa_A_212 - EH
1toa_A_271 - EH
1toa_A_41 - HE
1toa_A_160 - HE

1k0f A - percentage of sequence identity: 100
1nye D - percentage of sequence identity: 95
1toa A - percentage of sequence identity: 100
1toa B - percentage of sequence identity: 100