PDB: 1vec Compound: atp-dependent RNA helicase p54 Classification: RNA BINDING PROTEIN Entry date in PDB: 2004-04-13 Resolution [Å]: 2.01 R-Factor: 0.198

CHAIN: A SWISS-PROT/TREMBL: P26196    KEYWORD: ATP-binding    Chromosomal translocation    Helicase    Nuclear protein    Proto-oncogene    RNA-binding    SCOP: c.37.1.19 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Tandem AAA-ATPase domain    DEAD box RNA helicase rck/p54    Human (Homo sapiens) GO:  ATP binding    ATP-dependent helicase activity    helicase activity    nucleic acid binding    CHAIN: B SWISS-PROT/TREMBL: P26196    KEYWORD: ATP-binding    Chromosomal translocation    Helicase    Nuclear protein    Proto-oncogene    RNA-binding    SCOP: c.37.1.19 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Tandem AAA-ATPase domain    DEAD box RNA helicase rck/p54    Human (Homo sapiens) GO:  ATP binding    ATP-dependent helicase activity    helicase activity    nucleic acid binding

Image Source: PDB

Loops in ArchDB40 clusters

1vec_A_110 - HE => SUBCLASS : 2.1.1
1vec_A_271 - HE => SUBCLASS : 4.4.1
1vec_A_194 - HE => SUBCLASS : 4.40.1
1vec_A_246 - HE => SUBCLASS : 5.1.1
1vec_A_246 - HE => SUBCLASS : 5.1.2
1vec_A_212 - HE => SUBCLASS : 9.3.1
1vec_A_207 - EH => SUBCLASS : 1.1.1
1vec_A_207 - EH => SUBCLASS : 1.1.2
1vec_A_156 - EH => SUBCLASS : 2.1.2
1vec_A_185 - EH => SUBCLASS : 4.2.1
1vec_A_261 - EH => SUBCLASS : 4.11.1
1vec_A_94 - HH => SUBCLASS : 6.18.1

Loops in ArchDB95 clusters

1vec_A_207 - EH => SUBCLASS : 1.1.1
1vec_A_156 - EH => SUBCLASS : 2.1.3
1vec_A_185 - EH => SUBCLASS : 4.2.1
1vec_A_261 - EH => SUBCLASS : 4.4.1
1vec_A_94 - HH => SUBCLASS : 6.44.1
1vec_A_110 - HE => SUBCLASS : 2.1.1
1vec_A_271 - HE => SUBCLASS : 4.9.3
1vec_A_246 - HE => SUBCLASS : 5.1.1
1vec_A_212 - HE => SUBCLASS : 9.12.1

Loops not clustered in ArchDB

1vec_A_125 - EH
1vec_A_231 - EH
1vec_A_136 - HE
1vec_A_163 - HE
1vec_A_237 - HH

1s2m A - percentage of sequence identity: 61
1vec A - percentage of sequence identity: 100
1vec B - percentage of sequence identity: 100