ArchDB - Biological DataBase of Protein Loops

Information on 1xim

PDB: 1xim
Compound: D-xylose isomerase complex with xylitol-co
Classification: ISOMERASE(INTRAMOLECULAR OXIDOREDUCTSE)
Entry date in PDB: 1993-04-15
Resolution [Å]: 2.20
R-Factor: 0.152

CHAIN: A

SWISS-PROT/TREMBL: P12851
   KEYWORD: 3D-structure    Isomerase    Magnesium    Metal-binding    Pentose shunt    Xylose metabolism
EC: 5.3.1.5
SCOP: c.1.15.3 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Xylose isomerase-like    Xylose isomerase    D-xylose isomerase    Actinoplanes missouriensis
GO:  xylose isomerase activity    carbohydrate metabolism

CHAIN: B

CHAIN: C

CHAIN: D

Image Source: PDB

Stored Loops of 1xim

Loops in ArchDB95 clusters

1xim_A_50 - EH => SUBCLASS : 1.1.3
1xim_A_212 - EH => SUBCLASS : 3.1.1
1xim_A_212 - EH => SUBCLASS : 3.8.1
1xim_A_289 - EH => SUBCLASS : 6.2.3
1xim_A_142 - EH => SUBCLASS : 7.3.1
1xim_A_88 - EH => SUBCLASS : 17.1.1
1xim_A_218 - HH => SUBCLASS : 3.1.1
1xim_A_218 - HH => SUBCLASS : 3.1.10
1xim_A_369 - HH => SUBCLASS : 4.49.1
1xim_A_55 - HH => SUBCLASS : 6.22.1
1xim_A_354 - HH => SUBCLASS : 9.9.1
1xim_A_15 - HH => SUBCLASS : 16.3.1

Loops in ArchDB-EC clusters

1xim_A_15 - HH => SUBCLASS : 16.4.1

Loops not clustered in ArchDB

1xim_A_177 - AR
1xim_A_133 - AR
1xim_A_177 - AR
1xim_A_133 - AR
1xim_A_11 - EH
1xim_A_190 - EH
1xim_A_245 - EH
1xim_A_109 - HE
1xim_A_36 - HE
1xim_A_228 - HE
1xim_A_265 - HE
1xim_A_65 - HE
1xim_A_196 - HE
1xim_A_151 - HE
1xim_A_329 - HH
1xim_A_301 - HH

Homologous structures to 1xim classified in ArchDB

1bhw A - percentage of sequence identity: 99
1bhw B - percentage of sequence identity: 99
1bhw C - percentage of sequence identity: 99
1bhw D - percentage of sequence identity: 99
1clk A - percentage of sequence identity: 67
1did A - percentage of sequence identity: 67
1did B - percentage of sequence identity: 67
1die A - percentage of sequence identity: 67
1die B - percentage of sequence identity: 67
1dxi A - percentage of sequence identity: 67
1dxi B - percentage of sequence identity: 67
1gw9 A - percentage of sequence identity: 67
1mnz A - percentage of sequence identity: 67
1muw A - percentage of sequence identity: 67
1o1h A - percentage of sequence identity: 67
1o1h B - percentage of sequence identity: 67
1oad A - percentage of sequence identity: 66
1oad B - percentage of sequence identity: 66
1qt1 A - percentage of sequence identity: 66
1qt1 B - percentage of sequence identity: 66
1s5m A - percentage of sequence identity: 67
1s5n A - percentage of sequence identity: 67
1xib - - percentage of sequence identity: 67
1xic - - percentage of sequence identity: 67
1xid - - percentage of sequence identity: 67
1xie - - percentage of sequence identity: 67
1xif - - percentage of sequence identity: 67
1xig - - percentage of sequence identity: 67
1xih - - percentage of sequence identity: 67
1xii - - percentage of sequence identity: 67
1xij - - percentage of sequence identity: 67
1xim A - percentage of sequence identity: 100
1xim B - percentage of sequence identity: 100
1xim C - percentage of sequence identity: 100
1xim D - percentage of sequence identity: 100
1xin A - percentage of sequence identity: 99
1xin B - percentage of sequence identity: 99
1xin C - percentage of sequence identity: 99
1xin D - percentage of sequence identity: 99
1xis - - percentage of sequence identity: 67
1xla A - percentage of sequence identity: 67
1xla B - percentage of sequence identity: 67
1xlb A - percentage of sequence identity: 67
1xlb B - percentage of sequence identity: 67
1xlc A - percentage of sequence identity: 67
1xlc B - percentage of sequence identity: 67
1xld A - percentage of sequence identity: 67
1xld B - percentage of sequence identity: 67
1xle A - percentage of sequence identity: 67
1xle B - percentage of sequence identity: 67
1xlf A - percentage of sequence identity: 67
1xlf B - percentage of sequence identity: 67
1xlg A - percentage of sequence identity: 67
1xlg B - percentage of sequence identity: 67
1xlh A - percentage of sequence identity: 67
1xlh B - percentage of sequence identity: 67
1xli A - percentage of sequence identity: 67
1xli B - percentage of sequence identity: 67
1xlj A - percentage of sequence identity: 67
1xlj B - percentage of sequence identity: 67
1xlk A - percentage of sequence identity: 67
1xlk B - percentage of sequence identity: 67
1xll A - percentage of sequence identity: 67
1xll B - percentage of sequence identity: 67
1xlm A - percentage of sequence identity: 67
1xlm B - percentage of sequence identity: 67
1xya A - percentage of sequence identity: 67
1xya B - percentage of sequence identity: 67
1xyb A - percentage of sequence identity: 67
1xyb B - percentage of sequence identity: 67
1xyc A - percentage of sequence identity: 67
1xyc B - percentage of sequence identity: 67
1xyl A - percentage of sequence identity: 67
1xyl B - percentage of sequence identity: 67
1xym A - percentage of sequence identity: 67
1xym B - percentage of sequence identity: 67
2gyi A - percentage of sequence identity: 67
2gyi B - percentage of sequence identity: 67
2xim A - percentage of sequence identity: 99
2xim B - percentage of sequence identity: 99
2xim C - percentage of sequence identity: 99
2xim D - percentage of sequence identity: 99
2xin A - percentage of sequence identity: 99
2xin B - percentage of sequence identity: 99
2xin C - percentage of sequence identity: 99
2xin D - percentage of sequence identity: 99
2xis - - percentage of sequence identity: 67
3xim A - percentage of sequence identity: 99
3xim B - percentage of sequence identity: 99
3xim C - percentage of sequence identity: 99
3xim D - percentage of sequence identity: 99
3xin A - percentage of sequence identity: 99
3xin B - percentage of sequence identity: 99
3xin C - percentage of sequence identity: 99
3xin D - percentage of sequence identity: 99
3xis - - percentage of sequence identity: 67
4xia A - percentage of sequence identity: 67
4xia B - percentage of sequence identity: 67
4xim A - percentage of sequence identity: 100
4xim B - percentage of sequence identity: 100
4xim C - percentage of sequence identity: 100
4xim D - percentage of sequence identity: 100
4xis - - percentage of sequence identity: 67
5xia A - percentage of sequence identity: 67
5xia B - percentage of sequence identity: 67
5xim A - percentage of sequence identity: 100
5xim B - percentage of sequence identity: 100
5xim C - percentage of sequence identity: 100
5xim D - percentage of sequence identity: 100
5xin A - percentage of sequence identity: 99
5xin B - percentage of sequence identity: 99
5xin C - percentage of sequence identity: 99
5xin D - percentage of sequence identity: 99
6xia - - percentage of sequence identity: 67
6xim A - percentage of sequence identity: 100
6xim B - percentage of sequence identity: 100
6xim C - percentage of sequence identity: 100
6xim D - percentage of sequence identity: 100
7xim A - percentage of sequence identity: 100
7xim B - percentage of sequence identity: 100
7xim C - percentage of sequence identity: 100
7xim D - percentage of sequence identity: 100
8xia - - percentage of sequence identity: 67
8xim A - percentage of sequence identity: 99
8xim B - percentage of sequence identity: 99
8xim C - percentage of sequence identity: 99
8xim D - percentage of sequence identity: 99
9xia - - percentage of sequence identity: 67
9xim A - percentage of sequence identity: 99
9xim B - percentage of sequence identity: 99
9xim C - percentage of sequence identity: 99
9xim D - percentage of sequence identity: 99