PDB: 3seb Compound: staphylococcal enterotoxin b Classification: TOXIN Entry date in PDB: 1998-05-27 Resolution [Å]: 1.48 R-Factor: 0.182

CHAIN: - SWISS-PROT/TREMBL: P01552    KEYWORD: 3D-structure    Enterotoxin    Signal    Superantigen    Toxin    SCOP: b.40.2.2 All beta proteins    OB-fold    Bacterial enterotoxins    Superantigen toxins, N-terminal domain    Staphylococcal enterotoxin B, SEB    Staphylococcus aureus SCOP: d.15.6.1 Alpha and beta proteins (a+b)    beta-Grasp (ubiquitin-like)    Superantigen toxins, C-terminal domain    Superantigen toxins, C-terminal domain    Staphylococcal enterotoxin B, SEB    Staphylococcus aureus GO:  extracellular region    pathogenesis

Image Source: PDB

Loops in ArchDB40 clusters

3seb_*_182 - HA => SUBCLASS : 2.3.1
3seb_*_63 - EH => SUBCLASS : 2.1.2
3seb_*_141 - AR => SUBCLASS : 1.1.23

Loops in ArchDB95 clusters

3seb_*_63 - EH => SUBCLASS : 2.1.3
3seb_*_141 - AR => SUBCLASS : 1.2.29
3seb_*_33 - AR => SUBCLASS : 8.37.1
3seb_*_182 - HA => SUBCLASS : 2.3.1
3seb_*_222 - HA => SUBCLASS : 3.3.6

Loops not clustered in ArchDB

3seb_*_81 - AR
3seb_*_111 - AR
3seb_*_118 - AR
3seb_*_154 - EH
3seb_*_194 - EH
3seb_*_48 - HA
3seb_*_125 - HA
3seb_*_22 - HE
3seb_*_71 - HE
3seb_*_157 - HE
3seb_*_210 - HE

1bxt B - percentage of sequence identity: 62
1ck1 A - percentage of sequence identity: 65
1cqv A - percentage of sequence identity: 65
1d5m C - percentage of sequence identity: 100
1d5x C - percentage of sequence identity: 100
1d5z C - percentage of sequence identity: 100
1d6e C - percentage of sequence identity: 100
1goz A - percentage of sequence identity: 99
1goz B - percentage of sequence identity: 99
1i4q A - percentage of sequence identity: 65
1i4r A - percentage of sequence identity: 65
1i4x A - percentage of sequence identity: 65
1jck B - percentage of sequence identity: 65
1jck D - percentage of sequence identity: 65
1jwm D - percentage of sequence identity: 66
1jws D - percentage of sequence identity: 65
1jwu D - percentage of sequence identity: 65
1klg D - percentage of sequence identity: 65
1pyw D - percentage of sequence identity: 65
1sbb B - percentage of sequence identity: 100
1sbb D - percentage of sequence identity: 100
1se2 - - percentage of sequence identity: 65
1se3 - - percentage of sequence identity: 100
1se4 - - percentage of sequence identity: 100
1seb D - percentage of sequence identity: 100
1seb H - percentage of sequence identity: 100
1sje D - percentage of sequence identity: 65
1sjh D - percentage of sequence identity: 65
1ste - - percentage of sequence identity: 65
1t5x D - percentage of sequence identity: 65
1uns A - percentage of sequence identity: 65
2seb D - percentage of sequence identity: 100