Information on SUBCLASS 5.9.1 |
Subclass Accession number: 8580
Subclass: 5.9.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 19.0 +/- 20.4 Average RMSD (Å) : 1.043 +/- 0.190 Consensus geometry
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Consensus Sequence: | XpXPphphX |
(φψ)-conformation: | aabaappbb |
Pattern: | x | [APTV] | [fgltv] | [alm] | [aegqr] | x | [lv] | [aet] | [EKNQT] | x | [KP] | [DEKNS] | [AIM] | [kns] | [AILTV] | x |
Conservation: | -0.911 | 0.137 | -1.092 | 0.002 | -0.717 | -0.938 | 0.571 | -0.062 | 0.393 | -0.986 | 3.028 | 0.465 | 0.311 | 0.146 | 0.348 | -0.696 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cf3_A_29 | 1cf3 | A | 32 | 47 | LTTAARLTENPNISVL | HHHHHHHTTSTT--EE | aaaaaaaaaxaaxxbb |
1e8c_A_243 | 1e8c | A | 243 | 258 | EVGRRWLAKLPDAVAV | HHHHHHHTT-TT-EEE | aaaaaaaaabaaxbxb |
1f6w_A_394 | 1f6w | A | 399 | 414 | IALAQHRANAKSAKTY | HHHHHHHTT-SS--EE | aaaaaaaaapaapxbb |
1gpe_A_34 | 1gpe | A | 37 | 52 | LTVAAKLTENPKIKVL | HHHHHHHHTSTT--EE | aaaaaaaaaxaaxxbb |
1itw_A_65 | 1itw | A | 66 | 81 | LAELGKLATTPDANII | HHHHHHHTTSTT-EEE | aaaaaaaaabaapbbb |
1ivy_A_152 | 1ivy | A | 157 | 172 | PTLAVLVMQDPSMNLQ | HHHHHHHTT-TTS-EE | aaaaaaaaabaaxxxa |
1k1x_A_31 | 1k1x | A | 32 | 47 | RPFMEILEEFPEMKVN | HHHHHHHTT-TT--EE | aaaaaaaaabaaxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 29 |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 30 |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 31 |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | I - 49 |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 50 |
1e8c_A_243 | 1e8c | A | KCXLYSINE NZ-CARBOXYLIC ACID | W - 248 |
1e8c_A_243 | 1e8c | A | MSESELENOMETHIONINE | V - 258 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 34 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 35 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 36 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | I - 54 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 55 |
Clusters included in this Subclass |
CLUSTER: HE.7.22 |